Characterization of primary human immune responses to infection or vaccination often relies on surveying peripheral lymphocytes, as access to the sites where primary responses occur, such as the draining lymph nodes (LN), are not readily accessible due to anatomical location and ethical considerations. Thus, the majority of studies examining human B cell activation and plasma cell differentiation are performed in vitro under normoxic tissue culture conditions. However, B cells are activated, differentiate, within the low oxygen germinal center of the lymph node, and subsequently migrate from one anatomical compartment to another, where they encounter differing compartmental oxygen levels, ranging from 1-5% in the lymph node to 5-13% in the peripheral blood. The effects that oxygen levels have on B cells during an active immune response, in particular migration, is unknown. We hypothesize that oxygen tension is a previously unrecognized B cell regulatory switch, altering chemokine receptor signaling and controlling B cell migration. To test this hypothesis we propose the following specific Aims.
Aim 1 : Define and model the transcriptome and proteome pathways responsible for O2 dependent functional changes in B cell migratory capacity.
Aim 2 : Model the overlapping transcriptome and proteome pathways responsible for calcineurin perturbation of the HIF-1? molecular switch in human B cells.
Aim 3 : To assess the in vivo impact HIF-1? stabilization has on vaccine efficacy in a mouse model of immune suppression. The proposed work is intended to fill a critical gap in our understanding of human B cell responses, specifically the quantitative effects differing oxygen levels have on B cells migration.

Public Health Relevance

Human B cells responding to infection or vaccination encounter different oxygen levels as they are activated/differentiate within the developing germinal center of the draining lymph node and migrate from the lymph node (1-5% oxygen) to the peripheral blood (5-13% oxygen) ultimately ending up in the bone marrow (5-7%). This project proposes to characterize and model the molecular mechanisms by which changes in oxygen levels modulate human B cell migration. These studies will fill a critical gap in our understanding of human B cell responses, specifically the effects differing oxygen levels have on human B cells as they migrate within and from one anatomical compartment to another.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
5R01AI134058-03
Application #
9935030
Study Section
Modeling and Analysis of Biological Systems Study Section (MABS)
Program Officer
Gondre-Lewis, Timothy A
Project Start
2018-06-06
Project End
2023-05-31
Budget Start
2020-06-01
Budget End
2021-05-31
Support Year
3
Fiscal Year
2020
Total Cost
Indirect Cost
Name
University of Rochester
Department
Internal Medicine/Medicine
Type
School of Medicine & Dentistry
DUNS #
041294109
City
Rochester
State
NY
Country
United States
Zip Code
14627