The aim of this research is to investigate certain aspects of the molecular mechanism of gene expression in mammalian and other eukaryotic cells. We propose to continue our studies of the organization of nuclear ribonucleoprotein complexes containing hnRNA (hnRNP) sequences, and the role these structures play in the correct processing and splicing of mRNA sequences. Our previous results suggest a structure for hnRNP in which the large RNA molecule is folded on distinct protein complexes to give a repeating 30S RNP substructure. Most hnRNA sequences are bound to these 30S subcomplexes but certain distinctive RNA regions are exposed or complexed with proteins other than the relatively simple set of polypeptides found in the 30S particles; for example, self-complementary or double-stranded RNA regions appear to be exposed while nuclear poly(A) is contained in a discrete 15S substructure within hnRNP. Recently, we have begun a study of the distribution of snRNPs in relation to hnRNP to assess their role in RNA processing. We are now investigating the chemistry of the hnRNP proteins and using dissociation-reconstitution systems to analyze the specificity of protein:protein and protein:RNA interactions. Our polyclonal and monoclonal antibodies are used to examine the physiology of hnRNP and snRNP complexes. The distributions of hnRNP and snRNP complexes determined at the light and electron microscope levels differ significantly during the cell cycle and variations in the stoichiometry and metabolic properties of RNP proteins suggest that they may be significant factors in the modulation of growth and differentiation of normal and transformed cells. (G)

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
5R01CA012550-14
Application #
3163659
Study Section
Molecular Biology Study Section (MBY)
Project Start
1977-12-01
Project End
1986-02-28
Budget Start
1984-12-01
Budget End
1986-02-28
Support Year
14
Fiscal Year
1985
Total Cost
Indirect Cost
Name
University of Chicago
Department
Type
Schools of Medicine
DUNS #
225410919
City
Chicago
State
IL
Country
United States
Zip Code
60637
Sund, Malin; Kalluri, Raghu (2009) Tumor stroma derived biomarkers in cancer. Cancer Metastasis Rev 28:177-83
Eikesdal, Hans Petter; Kalluri, Raghu (2009) Drug resistance associated with antiangiogenesis therapy. Semin Cancer Biol 19:310-7
Zeisberg, Elisabeth M; Potenta, Scott E; Sugimoto, Hikaru et al. (2008) Fibroblasts in kidney fibrosis emerge via endothelial-to-mesenchymal transition. J Am Soc Nephrol 19:2282-7
Eikesdal, Hans Petter; Sugimoto, Hikaru; Birrane, Gabriel et al. (2008) Identification of amino acids essential for the antiangiogenic activity of tumstatin and its use in combination antitumor activity. Proc Natl Acad Sci U S A 105:15040-5
Leser, G P; Fakan, S; Martin, T E (1989) Ultrastructural distribution of ribonucleoprotein complexes during mitosis. snRNP antigens are contained in mitotic granule clusters. Eur J Cell Biol 50:376-89
Leser, G P; Martin, T E (1987) Changes in heterogeneous nuclear RNP core polypeptide complements during the cell cycle. J Cell Biol 105:2083-94
Martin, T E; Barghusen, S C; Leser, G P et al. (1987) Redistribution of nuclear ribonucleoprotein antigens during herpes simplex virus infection. J Cell Biol 105:2069-82
Maxwell, E S; Martin, T E (1986) Complementarity of sequences in low molecular weight RNAs to regions of messenger and ribosomal RNAs. Nucleic Acids Res 14:5741-60
Fakan, S; Leser, G; Martin, T E (1986) Immunoelectron microscope visualization of nuclear ribonucleoprotein antigens within spread transcription complexes. J Cell Biol 103:1153-7
Maxwell, E S; Martin, T E (1986) A low-molecular-weight RNA from mouse ascites cells that hybridizes to both 18S rRNA and mRNA sequences. Proc Natl Acad Sci U S A 83:7261-5