Abstract

The complexes of carcinogens with native DNA and synthetic deoxyoligonucleotides will be studied. The experiments are designed to locate the most reactive sequences for the carcinogens on plasmid DNA and fragments of oncogenes. The conformation of the complexes will be determined by using circular dichroism and one- and two-dimensional NMR spectroscopies.

  Funding Agency

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
2R01CA035251-04A2
Application #
3172857
Study Section
Biophysics and Biophysical Chemistry A Study Section (BBCA)
Project Start
1983-08-01
Project End
1990-06-30
Budget Start
1987-07-01
Budget End
1988-06-30
Support Year
4
Fiscal Year
1987
Total Cost
Indirect Cost

  Institution

Name
University of Rochester
Department
Type
Schools of Arts and Sciences
DUNS #
208469486
City
Rochester
State
NY
Country
United States
Zip Code
14627

  Publications

Rockwell, S; Knisely, J P (1997) Hypoxia and angiogenesis in experimental tumor models: therapeutic implications. EXS 79:335-60
Fountain, M A; Krugh, T R (1995) Structural characterization of a (+)-trans-anti-benzo[a]pyrene-DNA adduct using NMR, restrained energy minimization, and molecular dynamics. Biochemistry 34:3152-61
Eckel, L M; Krugh, T R (1994) Structural characterization of two interchangeable conformations of a 2-aminofluorene-modified DNA oligomer by NMR and energy minimization. Biochemistry 33:13611-24
O'Handley, S F; Sanford, D G; Xu, R et al. (1993) Structural characterization of an N-acetyl-2-aminofluorene (AAF) modified DNA oligomer by NMR, energy minimization, and molecular dynamics. Biochemistry 32:2481-97
Dittrich, K A; Krugh, T R (1991) Analysis of site-specific binding of (+/-)-anti-benzo[a]pyrene diol epoxide to restriction fragments of pBR322 DNA via photochemical mapping. Chem Res Toxicol 4:270-6
Dittrich, K A; Krugh, T R (1991) Mapping of (+/-)-anti-benzo[a]pyrene diol epoxide adducts to human c-Ha-ras1 protooncogene. Chem Res Toxicol 4:277-81
Huang, G J; Krugh, T R (1990) Large-scale purification of synthetic oligonucleotides and carcinogen-modified oligodeoxynucleotides on a reverse-phase polystyrene (PRP-1) column. Anal Biochem 190:21-5
Rockwell, S (1989) Tumor radiation responses and tumor oxygenation in aging mice. Exp Gerontol 24:37-48
Krugh, T R; Graves, D E; Stone, M P (1989) Two-dimensional NMR studies on the anthramycin-d(ATGCAT)2 adduct. Biochemistry 28:9988-94
Lamos, M L; Walker, G T; Krugh, T R et al. (1986) Fluorescence-detected circular dichroism of ethidium bound to poly(dG-dC) and poly(dG-m5dC) under B- and Z-form conditions. Biochemistry 25:687-91

Showing the most recent 10 out of 16 publications