Ionizing radiation and oxidizing agents form many damages in common in DNA. Some of the lesions are potentially mutagenic or carcinogenic. Little is currently known about whether or how most of these damages are enzymatically repaired, or what other responses they prompt in living cells. This problem will be addressed by taking advantage of DNA glycoslases that release specific products from oxidized DNA, and of a newly discovered inducible resistance to oxidizing agents and ionizing radiation. The glycosylases and sensitive chemical assays will allow us to assess the repair or persistence of a number of important oxidation lesions in cellular DNA under a variety of conditions, and the relationship of these to mutagenesis and toxicity. The peroxide-induced resistance to oxidation and radiation in E. coli is a key to determining the importance of known enzymes in repair of oxidized DNA, and to locating and molecular cloning of genes important in cellular recovery from oxidation and radiation. It will be investigated whether a similar induced response exists in eukaryotic cells, notably yeast. Known E. coli and yeast genes will be assessed for their importance in constitutive or induced resistance to oxidation. It will also be tested whether oxidation induces promiscuous or illegitimate recombinations. The results will have a direct bearing on deciding the biological effects of oxidation and of low-level radiation damage to DNA.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
5R01CA037831-04
Application #
3175694
Study Section
Microbial Physiology and Genetics Subcommittee 2 (MBC)
Project Start
1984-08-01
Project End
1989-01-31
Budget Start
1988-02-01
Budget End
1989-01-31
Support Year
4
Fiscal Year
1988
Total Cost
Indirect Cost
Name
Harvard University
Department
Type
Schools of Arts and Sciences
DUNS #
071723621
City
Cambridge
State
MA
Country
United States
Zip Code
02138
Liu, Chunhua; Kim, Eunsuk; Demple, Bruce et al. (2012) A DNA-based nanomechanical device used to characterize the distortion of DNA by Apo-SoxR protein. Biochemistry 51:937-43
Lee, Paul E; Demple, Bruce; Barton, Jacqueline K (2009) DNA-mediated redox signaling for transcriptional activation of SoxR. Proc Natl Acad Sci U S A 106:13164-8
Lee, Yunho; Pena-Llopis, Samuel; Kang, Yoon-Suk et al. (2006) Expression analysis of the fpr (ferredoxin-NADP+ reductase) gene in Pseudomonas putida KT2440. Biochem Biophys Res Commun 339:1246-54
Park, Woojun; Pena-Llopis, Samuel; Lee, Yunho et al. (2006) Regulation of superoxide stress in Pseudomonas putida KT2440 is different from the SoxR paradigm in Escherichia coli. Biochem Biophys Res Commun 341:51-6
Koutsolioutsou, Anastasia; Pena-Llopis, Samuel; Demple, Bruce (2005) Constitutive soxR mutations contribute to multiple-antibiotic resistance in clinical Escherichia coli isolates. Antimicrob Agents Chemother 49:2746-52
Chander, Monica; Demple, Bruce (2004) Functional analysis of SoxR residues affecting transduction of oxidative stress signals into gene expression. J Biol Chem 279:41603-10
Pomposiello, Pablo J; Koutsolioutsou, Anastasia; Carrasco, Daniel et al. (2003) SoxRS-regulated expression and genetic analysis of the yggX gene of Escherichia coli. J Bacteriol 185:6624-32
Chander, Monica; Raducha-Grace, Laura; Demple, Bruce (2003) Transcription-defective soxR mutants of Escherichia coli: isolation and in vivo characterization. J Bacteriol 185:2441-50
Koutsolioutsou, A; Martins, E A; White, D G et al. (2001) A soxRS-constitutive mutation contributing to antibiotic resistance in a clinical isolate of Salmonella enterica (Serovar typhimurium). Antimicrob Agents Chemother 45:38-43
Pomposiello, P J; Bennik, M H; Demple, B (2001) Genome-wide transcriptional profiling of the Escherichia coli responses to superoxide stress and sodium salicylate. J Bacteriol 183:3890-902

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