Cytogenetic data collected for over two decades has revealed that most subgroups of the leukemias and many solid tumors have consistent and characteristic chromosome defects. These specific defects are usually rearrangements or deletions of chromosomes with breakage at specific sites in the genome. Research in another area of cytogenetics has led to the recent discovery of chromosome fragile sites. Fragile sites are points on chromosomes that are especially prone to forming gaps and breaks as seen in metaphase spreads when cells are cultured under special conditions. Some fragile sites are rare while others are common in the population. It has recently been observed that there is a very high correlation between the location of fragile sites and the chromosome breakpoints recognized as characteristic of the leukemias, lymphomas and other forms of cancer. Suggestions have been made that fragile sites predispose to chromosome breakage and rearrangement and thus to cancer. This study proposes to begin to address this question by going beyond the development of correlation and coincidence of sites and studying the biological significance of fragile sites. The overall aim of this proposal is to test the hypothesis that chromosome fragile sites are """"""""hot spots"""""""" that predispose to chromosome deletions, rearrangements or recombination in somatic cells and that individual variation occurs in such predisposition. Human lymphocytes and lymphoblasts treat for fragile site expression in vitro will be cytogenetically characterized for chromosome rearrangements and other changes. In some experiments, these cells will be concurrently treated with known clastogens. In addition, the location of sister chromatid exchange breakpoints will be determined following fragile site induction to determine if fragile site expression may increase somatic recombination. In another approach, novel somatic cell hybrid systems will be created and characterized to serve as model systems for the study of chromosome breakage at both rare and common fragile sites. These hybrids will have the advantage that chromosome breakage and deletion at fragile sites will confer no selective disadvantage to the cells. Finally, given the hypothesis that fragile sites predispose to chromosome breakage at sites important in cancer, it will be determined if individual variation occurs in the expression of common fragile sites and if such variation has a heritable component in individual chromosomes that may place certain individuals at increased risk for cancer.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
1R01CA043222-01
Application #
3185310
Study Section
Mammalian Genetics Study Section (MGN)
Project Start
1986-07-01
Project End
1989-12-31
Budget Start
1986-07-01
Budget End
1987-12-31
Support Year
1
Fiscal Year
1986
Total Cost
Indirect Cost
Name
University of Michigan Ann Arbor
Department
Type
Schools of Medicine
DUNS #
791277940
City
Ann Arbor
State
MI
Country
United States
Zip Code
48109
Arlt, Martin F; Glover, Thomas W (2010) Inhibition of topoisomerase I prevents chromosome breakage at common fragile sites. DNA Repair (Amst) 9:678-89
Ragland, Ryan L; Arlt, Martin F; Hughes, Elizabeth D et al. (2009) Mice hypomorphic for Atr have increased DNA damage and abnormal checkpoint response. Mamm Genome 20:375-85
Howlett, Niall G; Harney, Julie A; Rego, Meghan A et al. (2009) Functional interaction between the Fanconi Anemia D2 protein and proliferating cell nuclear antigen (PCNA) via a conserved putative PCNA interaction motif. J Biol Chem 284:28935-42
Arlt, Martin F; Mulle, Jennifer G; Schaibley, Valerie M et al. (2009) Replication stress induces genome-wide copy number changes in human cells that resemble polymorphic and pathogenic variants. Am J Hum Genet 84:339-50
Ragland, Ryan L; Glynn, Michael W; Arlt, Martin F et al. (2008) Stably transfected common fragile site sequences exhibit instability at ectopic sites. Genes Chromosomes Cancer 47:860-72
Durkin, Sandra G; Ragland, Ryan L; Arlt, Martin F et al. (2008) Replication stress induces tumor-like microdeletions in FHIT/FRA3B. Proc Natl Acad Sci U S A 105:246-51
Durkin, Sandra G; Glover, Thomas W (2007) Chromosome fragile sites. Annu Rev Genet 41:169-92
Durkin, S G; Arlt, M F; Howlett, N G et al. (2006) Depletion of CHK1, but not CHK2, induces chromosomal instability and breaks at common fragile sites. Oncogene 25:4381-8
Miller, C T; Lin, L; Casper, A M et al. (2006) Genomic amplification of MET with boundaries within fragile site FRA7G and upregulation of MET pathways in esophageal adenocarcinoma. Oncogene 25:409-18
Glover, Thomas W (2006) Common fragile sites. Cancer Lett 232:4-12

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