The long-term goal of this project is to understand the molecular mechanisms underlying leukemia relapse. There are more than 21,000 deaths to relapsed leukemia each year in the United States, but the molecular basis of this deadly disease is still unknown. Since leukemia relapse is always associated with chemotherapy, and since cells exposed to therapeutic agents usually acquire a mismatch repair (MMR) deficient phenotype, we hypothesize that leukemia relapse in many cases is caused by a small fraction of leukemic cells that have adopted an MMR deficient phenotype during the course of chemotherapy. Our preliminary studies have showed that defects in MMR are indeed associated with cell lines derived from relapsed leukemia and patients with relapsed leukemia. To further test our hypothesis, this application proposes both genetic and biochemical approaches to analyze the relationship between relapsed leukemia and MMR proficiency. First, real-time PCR will be used to analyze the status of microsatellite sequences in adult acute leukemia patient samples at presentation, remission, and relapse to dynamically and quantitatively determine how leukemic cells transform from a microsatellite stable form to a microsatellite instable form during the development of relapse. Second, leukemic cells from relapsed patients will be analyzed for genetic alterations and epigenetic modifications in key MMR genes such as hMSH2 and hMLH1 using combination technologies of PCR-based single strand conformation polymorphism, DNA sequencing, and methylation-specific PCR. Third, individual alterations identified in leukemia patients will be introduced into MMR genes to express recombinant mutant proteins. To determine the actual impact of these alterations on MMR function, individual recombinant mutant proteins will be examined for their ability to restore MMR to the corresponding MMR mutant extracts using an in vitro functional MMR assay. This study will provide significant insight into the mechanism underlying leukemia relapse as well as vital information for designing therapeutic regimens for the disease.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
5R01CA104333-04
Application #
7337617
Study Section
Cancer Genetics Study Section (CG)
Program Officer
Okano, Paul
Project Start
2005-04-01
Project End
2010-02-28
Budget Start
2008-03-01
Budget End
2009-02-28
Support Year
4
Fiscal Year
2008
Total Cost
$253,918
Indirect Cost
Name
University of Kentucky
Department
Pharmacology
Type
Schools of Medicine
DUNS #
939017877
City
Lexington
State
KY
Country
United States
Zip Code
40506
Li, Feng; Mao, Guogen; Tong, Dan et al. (2013) The histone mark H3K36me3 regulates human DNA mismatch repair through its interaction with MutS?. Cell 153:590-600
Martin-Lopez, Juana V; Barrios, Ysamar; Medina-Arana, Vicente et al. (2012) The hMSH2(M688R) Lynch syndrome mutation may function as a dominant negative. Carcinogenesis 33:1647-54
Chan, Nelson L S; Hou, Caixia; Zhang, Tianyi et al. (2012) The Werner syndrome protein promotes CAG/CTG repeat stability by resolving large (CAG)(n)/(CTG)(n) hairpins. J Biol Chem 287:30151-6
Gu, Liya; Ensor, Charles M; Li, Guo-Min (2012) In vitro DNA mismatch repair in human cells. Methods Mol Biol 920:135-47
Zhang, Tianyi; Huang, Jian; Gu, Liya et al. (2012) In vitro repair of DNA hairpins containing various numbers of CAG/CTG trinucleotide repeats. DNA Repair (Amst) 11:201-9
Mao, Guogen; Lee, Sanghee; Ortega, Janice et al. (2012) Modulation of microRNA processing by mismatch repair protein MutL?. Cell Res 22:973-85
Tian, Lei; Gu, Liya; Li, Guo-Min (2009) Distinct nucleotide binding/hydrolysis properties and molar ratio of MutSalpha and MutSbeta determine their differential mismatch binding activities. J Biol Chem 284:11557-62
Hou, Caixia; Chan, Nelson L S; Gu, Liya et al. (2009) Incision-dependent and error-free repair of (CAG)(n)/(CTG)(n) hairpins in human cell extracts. Nat Struct Mol Biol 16:869-75
Tian, Lei; Hou, Caixia; Tian, Keli et al. (2009) Mismatch recognition protein MutSbeta does not hijack (CAG)n hairpin repair in vitro. J Biol Chem 284:20452-6
Zhang, Yanbin; Yuan, Fenghua; Wang, Daojing et al. (2008) Identification of regulatory factor X as a novel mismatch repair stimulatory factor. J Biol Chem 283:12730-5

Showing the most recent 10 out of 14 publications