The anti-apoptotic protein Mcl-1 (myeloid cell leukemia), a member of the Bcl-2 family proteins, is an important survival factor for many cancers and is a promising therapeutic target. There are however no known specific small-molecule inhibitors of Mcl-1. Mcl-1 is a homologous protein related to other anti-apoptotic proteins such as Bcl-2 and Bcl-xL, but it has a distinctly different structure and exhibits selective binding to the pro-apoptotic BH3-only proteins. This suggests that specific targeting of the Mcl-1 protein is possible and that drugs specific to Mcl-1 can be developed. ABT- 737, a potent small-molecule inhibitor designed to bind to Bcl-2 and Bcl-xL fails to bind to Mcl-1 and does not induce apoptosis in cancer cells with high levels of Mcl-1 but is effective when the Mcl-1 expression is knocked down, indicating the critical importance of Mcl-1 in maintaining cell survival when Bcl-2 and Bcl-xL are inhibited. Targeting Mcl-1 is therefore an important strategy for the development of a new class of anticancer drugs which can overcome apoptosis resistance. We have identified by high throughput screening over 20 novel, small-molecule inhibitors of Mcl-1. Using complementary biochemical, biophysical, functional and cellular based assays we have evaluated and characterized their potency, specificity, and mechanism of action. The most promising compounds, 59, 62 and 65 have diverse chemical scaffolds. We have shown that these small molecule inhibitors bind to the BH3 binding site in Mcl-1 with IC50 values of 1200 nM, 200 nM and 500 nM, respectively, and compete with BH3 peptides derived from Bid, Bim, or Noxa proteins. They bind to the Mcl-1 protein selectively over two other Bcl- 2 family members, Bcl-2 and Bcl-xL. We conclusively confirmed by NMR spectroscopy that these lead compounds bind to the same BH3 domain of Mcl-1 as the Bim BH3 peptide. These lead compounds antagonize Mcl-1 on the functional level and they induce release of cytochrome c, inhibit cell growth and induce apoptosis in melanoma and lymphoma cancer cell lines with high levels of Mcl-1 showing selectivity over normal cells. We have tested several synthetic and commercially available analogues of 59 and 62, and established initial structure-activity relationships. One of the compounds tested (77), an analogue of 59, has improved binding affinity to Mcl-1 protein, as well as potent activity in inhibition of cell growth in cancer cells. Our results suggest that it is possible to develop small-molecule inhibitors specific for the Mcl-1 protein. We propose in this application to further optimize these lead compounds through a structure-based strategy and integrating experimental structural biology, computational modeling, design and synthesis, and biochemical and biological testing.

Public Health Relevance

Resistance to apoptosis is a common challenge in human malignancies which underlies resistance to conventional chemotherapy and approaches that specifically target apoptotic mechanisms are receiving significant attention. Myeloid cell leukemia-1 (Mcl-1), a member of the Bcl-2 family of proteins, which are central regulators of apoptosis, has been to found to be overexpressed in both solid and non-solid tumor cell lines and human cancer tissues. Such overexpression of Mcl-1 has been associated with tumor initiation, progression and appears to be a key factor in the resistance of some cancer types to current chemotherapies. Targeting the Mcl-1 protein is therefore an important strategy for the development of new class of anticancer drugs which can overcome cancer cells'resistance to apoptosis. Through high throughput screening, we have discovered over 20 promising small molecule Mcl-1 inhibitors and in this application, we propose to perform further chemical modifications in order to improve their potency, specificity and efficacy in treatment of cancer.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
1R01CA149442-01
Application #
7864906
Study Section
Drug Discovery and Molecular Pharmacology Study Section (DMP)
Program Officer
Lees, Robert G
Project Start
2010-04-01
Project End
2015-01-31
Budget Start
2010-04-01
Budget End
2011-01-31
Support Year
1
Fiscal Year
2010
Total Cost
$333,474
Indirect Cost
Name
University of Michigan Ann Arbor
Department
Pathology
Type
Schools of Medicine
DUNS #
073133571
City
Ann Arbor
State
MI
Country
United States
Zip Code
48109
Tong, Jingshan; Zheng, Xingnan; Tan, Xiao et al. (2018) Mcl-1 Phosphorylation without Degradation Mediates Sensitivity to HDAC Inhibitors by Liberating BH3-Only Proteins. Cancer Res 78:4704-4715
Mady, Ahmed S A; Liao, Chenzhong; Bajwa, Naval et al. (2018) Discovery of Mcl-1 inhibitors from integrated high throughput and virtual screening. Sci Rep 8:10210
Tong, Jingshan; Tan, Shuai; Nikolovska-Coleska, Zaneta et al. (2017) FBW7-Dependent Mcl-1 Degradation Mediates the Anticancer Effect of Hsp90 Inhibitors. Mol Cancer Ther 16:1979-1988
Tong, Jingshan; Wang, Peng; Tan, Shuai et al. (2017) Mcl-1 Degradation Is Required for Targeted Therapeutics to Eradicate Colon Cancer Cells. Cancer Res 77:2512-2521
Burrer, Christine M; Auburn, Helen; Wang, Xu et al. (2017) Mcl-1 small-molecule inhibitors encapsulated into nanoparticles exhibit increased killing efficacy towards HCMV-infected monocytes. Antiviral Res 138:40-46
Koss, Brian; Ryan, Jeremy; Budhraja, Amit et al. (2016) Defining specificity and on-target activity of BH3-mimetics using engineered B-ALL cell lines. Oncotarget 7:11500-11
Cojohari, Olesea; Burrer, Christine M; Peppenelli, Megan A et al. (2015) BH3 Profiling Reveals Selectivity by Herpesviruses for Specific Bcl-2 Proteins To Mediate Survival of Latently Infected Cells. J Virol 89:5739-46
Chen, L; Chen, W; Mysliwski, M et al. (2015) Mutated Ptpn11 alters leukemic stem cell frequency and reduces the sensitivity of acute myeloid leukemia cells to Mcl1 inhibition. Leukemia 29:1290-300
Abulwerdi, Fardokht A; Liao, Chenzhong; Mady, Ahmed S et al. (2014) 3-Substituted-N-(4-hydroxynaphthalen-1-yl)arylsulfonamides as a novel class of selective Mcl-1 inhibitors: structure-based design, synthesis, SAR, and biological evaluation. J Med Chem 57:4111-33
Abulwerdi, Fardokht; Liao, Chenzhong; Liu, Meilan et al. (2014) A novel small-molecule inhibitor of mcl-1 blocks pancreatic cancer growth in vitro and in vivo. Mol Cancer Ther 13:565-75

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