Phage display and combinatorial chemistry are two high throughput approaches for identification of targeted therapeutics of cancer. However, a phage display library has a limited structural diversity and small molecules generated by combinatorial chemistry generally cannot be pooled in large numbers for efficient screening. Our long term goal is to combine the rapid-screening feature of phage display and the diversity- generating power of synthetic chemistry to assemble approaches for high throughput identification of small- molecule antiangiogenic agents and apply these molecules to cancer diagnosis, profiling, imaging, and therapy. The primary objective of this particular application is to develop methods for constructing phage display libraries with expanded chemical diversities and screening these libraries to identify ligands specific for vascular endothelial growth factor (VEGF), a key target of antiangiogenic drugs. Our central hypothesis is that the chemical diversity of a phage display library can be significantly expanded by genetically incorporating two different noncanonical amino acids (NAAs) into the library, varying the identities of NAAs, and/or chemically modifying the incorporated NAAs. The rationale for the proposed research is that, once these unnatural phage display libraries are constructed, a large variety of unnatural peptides with diversified chemical structures can be rapidly screened against many cancer therapeutic targets, leading to identification of new therapeutics for cancer treatment and prevention. Guided by strong preliminary data, the objective of this application will be attained by pursuing three specific aims: 1) Optimize M13KE phage for the unbiased display of 20 natural amino acids and 2 NAAs;2) Construct unnatural phage display libraries incorporated with different combinations of 2 NAAs and screen these libraries to identify VEGF-specific ligands;and 3) Expand the chemical diversity of unnatural phage display libraries by expanding the pool of genetically encoded NAAs and selectively modifying the incorporated NAAs. The research proposed in this application is innovative, because it will expand the phage display technique significantly by amending the displayed peptides with diversified structure moieties desirable for drug discovery. The proposed research is significant because it will accelerate the current drug discovery progresses and contribute to fulfilling the NIH mission in promoting health and combating diseases.

Public Health Relevance

The proposed research is relevant to public health because it aims to assemble efficient high throughput approaches for identification of targeted cancer therapeutics. The project is relevant to NIH's mission in promoting health and combating diseases because it will accelerate the current drug discovery progresses.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
5R01CA161158-02
Application #
8289395
Study Section
Drug Discovery and Molecular Pharmacology Study Section (DMP)
Program Officer
Knowlton, John R
Project Start
2011-07-01
Project End
2016-04-30
Budget Start
2012-05-01
Budget End
2013-04-30
Support Year
2
Fiscal Year
2012
Total Cost
$297,466
Indirect Cost
$89,966
Name
Texas A&M University
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
078592789
City
College Station
State
TX
Country
United States
Zip Code
77845
Wang, Zhipeng A; Liu, Wenshe R (2017) Proteins with Site-Specific Lysine Methylation. Chemistry 23:11732-11737
Zhu, Mingzhao; Harshbarger, Wayne D; Robles, Omar et al. (2017) A strategy for dual inhibition of the proteasome and fatty acid synthase with belactosin C-orlistat hybrids. Bioorg Med Chem 25:2901-2916
Tian, Yulin; Jacinto, Marco Paolo; Zeng, Yu et al. (2017) Genetically Encoded 2-Aryl-5-carboxytetrazoles for Site-Selective Protein Photo-Cross-Linking. J Am Chem Soc 139:6078-6081
Wang, Zhipeng A; Zeng, Yu; Kurra, Yadagiri et al. (2017) A Genetically Encoded Allysine for the Synthesis of Proteins with Site-Specific Lysine Dimethylation. Angew Chem Int Ed Engl 56:212-216
Wang, Zhipeng A; Kurra, Yadagiri; Wang, Xin et al. (2017) A Versatile Approach for Site-Specific Lysine Acylation in Proteins. Angew Chem Int Ed Engl 56:1643-1647
Lee, Yan-Jiun; Schmidt, M J; Tharp, Jeffery M et al. (2016) Genetically encoded fluorophenylalanines enable insights into the recognition of lysine trimethylation by an epigenetic reader. Chem Commun (Camb) 52:12606-12609
Tharp, Jeffery M; Liu, Wenshe R (2016) The ""?-Clamp"" Offers a New Strategy for Site-Selective Protein Modification. Chembiochem 17:883-5
Sharma, Vangmayee; Wang, Yane-Shih; Liu, Wenshe R (2016) Probing the Catalytic Charge-Relay System in Alanine Racemase with Genetically Encoded Histidine Mimetics. ACS Chem Biol 11:3305-3309
Lee, Yan-Jiun; Kurra, Yadagiri; Liu, Wenshe R (2016) Phospha-Michael Addition as a New Click Reaction for Protein Functionalization. Chembiochem 17:456-61
Wang, Wesley Wei; Zeng, Yu; Wu, Bo et al. (2016) A Chemical Biology Approach to Reveal Sirt6-targeted Histone H3 Sites in Nucleosomes. ACS Chem Biol 11:1973-81

Showing the most recent 10 out of 25 publications