The overall goal of this project is to fully elucidate the mechanism of action and cellular role of the enzyme yeast inorganic pyrophosphatase. For the three year period of support requested, the specific aims fall into four areas: I. Studies on native PPase, II. Isolation and sequencing of a yeast PPase clone, III. Generation of point-specific PPase mutants for biochemical studies, IV. Manipulation of PPase levels for studies of PPase cellular function. With respect to I, our major goals are to: complete the determination of the relative orientation of the three or four divalent ions and two Pi's (or one PPi) bound per subunit of enzyme; identify additional amino acid residues at or near the active site; resolve the remaining ambiguities concerning the stereochemistry of enzyme catalysis; test the adequacy of our minimal scheme in accounting for overall PPase catalyses. With respect to II our goal is to isolate and sequence a PPase clone. In work on III, we will: use such a clone to express yeast PPase in a heterologous system; exploit such a system to produce site-specific mutants in PPase; examine the function of essential amino acid residues at the active site through functional studies on the mutant enzymes. Finally, in work on IV, we will exploit the PPase clone to construct yeast strains having both higher and lower levels of PPase compared to wild type. The phenotypes of such strains will then be tested in order to develop a convincing model of the cellular function of PPase.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
5R01DK013212-17
Application #
3225002
Study Section
Biochemistry Study Section (BIO)
Project Start
1977-01-01
Project End
1987-06-30
Budget Start
1986-01-01
Budget End
1987-06-30
Support Year
17
Fiscal Year
1986
Total Cost
Indirect Cost
Name
University of Pennsylvania
Department
Type
Schools of Arts and Sciences
DUNS #
042250712
City
Philadelphia
State
PA
Country
United States
Zip Code
19104
Halonen, Pasi; Baykov, Alexander A; Goldman, Adrian et al. (2002) Single-turnover kinetics of Saccharomyces cerevisiae inorganic pyrophosphatase. Biochemistry 41:12025-31
Hyytia, T; Halonen, P; Salminen, A et al. (2001) Ligand binding sites in Escherichia coli inorganic pyrophosphatase: effects of active site mutations. Biochemistry 40:4645-53
Baykov, A A; Hyytia, T; Turkina, M V et al. (1999) Functional characterization of Escherichia coli inorganic pyrophosphatase in zwitterionic buffers. Eur J Biochem 260:308-17
Velichko, I S; Mikalahti, K; Kasho, V N et al. (1998) Trimeric inorganic pyrophosphatase of Escherichia coli obtained by directed mutagenesis. Biochemistry 37:734-40
Pohjanjoki, P; Lahti, R; Goldman, A et al. (1998) Evolutionary conservation of enzymatic catalysis: quantitative comparison of the effects of mutation of aligned residues in Saccharomyces cerevisiae and Escherichia coli inorganic pyrophosphatases on enzymatic activity. Biochemistry 37:1754-61
Fabrichniy, I P; Kasho, V N; Hyytia, T et al. (1997) Structural and functional consequences of substitutions at the tyrosine 55-lysine 104 hydrogen bond in Escherichia coli inorganic pyrophosphatase. Biochemistry 36:7746-53
Kankare, J; Salminen, T; Lahti, R et al. (1996) Crystallographic identification of metal-binding sites in Escherichia coli inorganic pyrophosphatase. Biochemistry 35:4670-7
Heikinheimo, P; Lehtonen, J; Baykov, A et al. (1996) The structural basis for pyrophosphatase catalysis. Structure 4:1491-508
Salminen, T; Teplyakov, A; Kankare, J et al. (1996) An unusual route to thermostability disclosed by the comparison of Thermus thermophilus and Escherichia coli inorganic pyrophosphatases. Protein Sci 5:1014-25
Baykov, A A; Hyytia, T; Volk, S E et al. (1996) Catalysis by Escherichia coli inorganic pyrophosphatase: pH and Mg2+ dependence. Biochemistry 35:4655-61

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