The focus of the current proposal is the Na/dicarboxylate cotransporters of the renal proximal tubule, particularly NaDC-1, the low affinity transporter of the apical membrane. NaDC-1 plays an important role in the absorption of Krebs cycle intermediates, such as citrate and succinate. The transport activity of NaDC-1 affects physiological functions such as citrate homeostasis in the urine (which influences the development of kidney stones), organic anion secretion, maintenance of acid-base balance, and overall metabolic status of the body. The long-term objective of this research is to determine the structural basis of ion and substrate binding and translocation in the Na+/dicarboxylate cotransporters to better understand the mechanism of ion-coupled transport. The results generated in the current grant period have identified several key amino acids that may participate in substrate and cation binding and may form part of the permeation pathway through the protein. In the first specific aim of this proposal, we plan to identify additional residues and domains in the NaDC-1 transporters that determine specific functional properties, such as substrate and cation selectivity and affinity, and sensitivity to inhibitors. In the second specific aim, we plan to use the substituted cysteine-accessibility method to identify the ion and substrate permeation pathways in NaDC-1. In the third aim, we plan to refine the secondary structure model of NaDC-1. The studies outlined in this proposal should provide fundamental information on the functional properties of the NaDC-related family of sodium-coupled transporters and on the physiological role of these transporters in the kidney.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
2R01DK046269-10
Application #
6431072
Study Section
General Medicine B Study Section (GMB)
Program Officer
Ketchum, Christian J
Project Start
1993-04-01
Project End
2006-12-31
Budget Start
2002-01-01
Budget End
2002-12-31
Support Year
10
Fiscal Year
2002
Total Cost
$350,150
Indirect Cost
Name
University of Texas Medical Br Galveston
Department
Neurosciences
Type
Schools of Medicine
DUNS #
041367053
City
Galveston
State
TX
Country
United States
Zip Code
77555
Pajor, Ana M; Sun, Nina N; Leung, Alva (2013) Functional characterization of SdcF from Bacillus licheniformis, a homolog of the SLC13 Na?/dicarboxylate transporters. J Membr Biol 246:705-15
Pajor, Ana M; Sun, Nina N (2013) Nonsteroidal anti-inflammatory drugs and other anthranilic acids inhibit the Na(+)/dicarboxylate symporter from Staphylococcus aureus. Biochemistry 52:2924-32
Pajor, Ana M; Sun, Nina N; Joshi, Aditya D et al. (2011) Transmembrane helix 7 in the Na+/dicarboxylate cotransporter 1 is an outer helix that contains residues critical for function. Biochim Biophys Acta 1808:1454-61
Pajor, Ana M; Sun, Nina N (2010) Single nucleotide polymorphisms in the human Na+-dicarboxylate cotransporter affect transport activity and protein expression. Am J Physiol Renal Physiol 299:F704-11
Pajor, Ana M; Sun, Nina N (2010) Role of isoleucine-554 in lithium binding by the Na+/dicarboxylate cotransporter NaDC1. Biochemistry 49:8937-43
Strickler, Melodie A; Hall, Jason A; Gaiko, Olga et al. (2009) Functional characterization of a Na(+)-coupled dicarboxylate transporter from Bacillus licheniformis. Biochim Biophys Acta 1788:2489-96
Joshi, Aditya D; Pajor, Ana M (2009) Identification of conformationally sensitive amino acids in the Na(+)/dicarboxylate symporter (SdcS). Biochemistry 48:3017-24
Weerachayaphorn, Jittima; Pajor, Ana M (2008) Identification of transport pathways for citric acid cycle intermediates in the human colon carcinoma cell line, Caco-2. Biochim Biophys Acta 1778:1051-9
Weerachayaphorn, Jittima; Pajor, Ana M (2008) Threonine-509 is a determinant of apparent affinity for both substrate and cations in the human Na+/dicarboxylate cotransporter. Biochemistry 47:1087-93
Weerachayaphorn, Jittima; Pajor, Ana M (2007) Sodium-dependent extracellular accessibility of Lys-84 in the sodium/dicarboxylate cotransporter. J Biol Chem 282:20213-20

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