Transcriptional regulation plays a fundamental role in specifying cellular and tissue differentiation, cell growth, development and susceptibility to diseases. The highly regulated process of eukaryotic gene expression is coordinated by the interplay of multiple mechanisms involving chromatin, transcription factors such as nuclear hormone receptors and critical accessory/regulatory proteins with histone/chromatin modifying activities. Histones undergo posttranslational modifications such as acetylation, phosphorylation and methylation. These modified histones subsequently led to the establishment of a """"""""histone code"""""""" of transcription. For example, unmodified histones repress transcription while acetylated histories promote gene activation. The mechanisms by which unmodified histones """"""""code"""""""" for transcriptional repression in higher eukaryotes are largely unknown. Post-translational modification of coregulators also influence gene transcription. The long-term goal of our research is to identify and molecularly characterize novel mechanisms regulating hormonal signaling and transcription. We have recently shown that a human cellular complex termed INHAT regulates nuclear receptor function and transcription at least in part by binding to histones and modulating histone acetyltransferase activity of coactivators, pp32 is a subunit of the INHAT complex and a nuclear phosphoprotein. We hypothesize that pp32 is a critical component in transcriptional repression and that phosphorylation of pp32 plays a critical role in its in vivo function. To test the hypotheses we will (1) determine the role ofpp32 in translating the repressive """"""""histone code"""""""" of transcription; (2) characterize molecular mechanisms of transcriptional repression by pp32; and (3) analyze the role of phosphorylation in pp32 function in vivo. We will address the above specific aims using a combination of in vitro and in vivo analyses involving biochemical, molecular, and cell biological methodologies. Altered activities of proteins regulating histone modifications and protein phosphorylation have been linked to altered hormone signaling and human diseases including cancer, and developmental abnormalities. The information stemming from the proposed studies should not only provide a better understanding of transcription and hormone signaling but may also be useful in targeted drug development to treat human diseases.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
7R01DK065148-03
Application #
7024423
Study Section
Endocrinology Study Section (END)
Program Officer
Margolis, Ronald N
Project Start
2004-03-01
Project End
2009-02-28
Budget Start
2006-03-01
Budget End
2007-02-28
Support Year
3
Fiscal Year
2006
Total Cost
$310,311
Indirect Cost
Name
Northwestern University at Chicago
Department
Obstetrics & Gynecology
Type
Schools of Medicine
DUNS #
005436803
City
Chicago
State
IL
Country
United States
Zip Code
60611
Chakravarti, Debabrata (2009) Regulatory mechanisms in transcriptional signaling by nuclear hormone receptors, and their regulators: implications in physiology and disease. Introduction. Prog Mol Biol Transl Sci 87:xv-xxii
Loomis, Rebecca J; Naoe, Yoshinori; Parker, J Brandon et al. (2009) Chromatin binding of SRp20 and ASF/SF2 and dissociation from mitotic chromosomes is modulated by histone H3 serine 10 phosphorylation. Mol Cell 33:450-61
Buranapramest, Manop; Chakravarti, Debabrata (2009) Chromatin remodeling and nuclear receptor signaling. Prog Mol Biol Transl Sci 87:193-234
Ewing, Amy K; Attner, Michelle; Chakravarti, Debabrata (2007) Novel regulatory role for human Acf1 in transcriptional repression of vitamin D3 receptor-regulated genes. Mol Endocrinol 21:1791-806
Macfarlan, Todd; Parker, J Brandon; Nagata, Kyosuke et al. (2006) Thanatos-associated protein 7 associates with template activating factor-Ibeta and inhibits histone acetylation to repress transcription. Mol Endocrinol 20:335-47
Macfarlan, Todd; Kutney, Sara; Altman, Brian et al. (2005) Human THAP7 is a chromatin-associated, histone tail-binding protein that represses transcription via recruitment of HDAC3 and nuclear hormone receptor corepressor. J Biol Chem 280:7346-58
Kutney, Sara N; Hong, Rui; Macfarlan, Todd et al. (2004) A signaling role of histone-binding proteins and INHAT subunits pp32 and Set/TAF-Ibeta in integrating chromatin hypoacetylation and transcriptional repression. J Biol Chem 279:30850-5
Hong, Rui; Macfarlan, Todd; Kutney, Sara N et al. (2004) The identification of phosphorylation sites of pp32 and biochemical purification of a cellular pp32-kinase. Biochemistry 43:10157-65