Obesity has become a national epidemic. We propose to seek DNA polymorphisms associated with higher BMI, to identify genes involved in obesity. This application builds upon a genome scan for BMI performed in the NHLBI Family Heart Study (FHS) on 4,211 subjects in 718 families. We will extend this work by disequilibrium mapping under one of the largest linkage peaks on chromosome 13q 14 (lod=3.2). We will focus our efforts on 144 families (715 individuals) with the highest contribution to the support for the linkage. We will refine the location of the underlying QTL by statistically modeling epistatic effects, sex effects, and possible pleiotropic effects. A series of candidate genes falling in the linkage region will be evaluated by SNP-typing, and if no associations are found, disequilibrium mapping techniques will be applied to the anonymous region under the linkage peak. We will begin with three well-motivated candidate genes - HRT2A, EDNRB, and LMO7 - and we have identified 12 others using bioinformatics resources. In a related aim, we will also test obesity candidate genes located in other regions of suggestive linkage (1.5<1od<2.0), using a case-control sample, comprised of subjects with the highest and lowest BMIs in the study. Two groups of 350 unrelated subjects each, equally distributed over the 4 field centers and 2 sexes, aged 40-70 years, will be genotyped. We will test adiponectin and apoD (3q29), PPARgamma (3p25), and ADRB2 (5q31). A variety of statistical modeling techniques will be used including haplotype analysis, hierarchical linkage disequilibrium mapping incorporating information on block structure, and a Bayesian approach to evaluating all possible haplotypes within a region. We believe that the state-of-the-art approaches proposed here, as well as the experience of the investigative team in all relevant realms - study design, genotyping and bioinformatics, and statistical model development and analysis - will lead to new discoveries of the genes and specific variants influencing human obesity.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
1R01DK068336-01
Application #
6816115
Study Section
Epidemiology of Chronic Diseases Study Section (ECD)
Program Officer
Karp, Robert W
Project Start
2004-09-20
Project End
2007-06-30
Budget Start
2004-09-20
Budget End
2005-06-30
Support Year
1
Fiscal Year
2004
Total Cost
$572,283
Indirect Cost
Name
Washington University
Department
Biostatistics & Other Math Sci
Type
Schools of Medicine
DUNS #
068552207
City
Saint Louis
State
MO
Country
United States
Zip Code
63130
Kilpeläinen, Tuomas O; Carli, Jayne F Martin; Skowronski, Alicja A et al. (2016) Genome-wide meta-analysis uncovers novel loci influencing circulating leptin levels. Nat Commun 7:10494
Murabito, Joanne M; White, Charles C; Kavousi, Maryam et al. (2012) Association between chromosome 9p21 variants and the ankle-brachial index identified by a meta-analysis of 21 genome-wide association studies. Circ Cardiovasc Genet 5:100-12
Kilpeläinen, Tuomas O; Zillikens, M Carola; Stan?ákova, Alena et al. (2011) Genetic variation near IRS1 associates with reduced adiposity and an impaired metabolic profile. Nat Genet 43:753-60
Manning, Alisa K; LaValley, Michael; Liu, Ching-Ti et al. (2011) Meta-analysis of gene-environment interaction: joint estimation of SNP and SNP × environment regression coefficients. Genet Epidemiol 35:11-8
Heid, Iris M (see original citation for additional authors) (2010) Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. Nat Genet 42:949-60
Speliotes, Elizabeth K (see original citation for additional authors) (2010) Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. Nat Genet 42:937-48
Lango Allen, Hana (see original citation for additional authors) (2010) Hundreds of variants clustered in genomic loci and biological pathways affect human height. Nature 467:832-8
Feitosa, Mary F; North, Kari E; Myers, Richard H et al. (2009) Evidence for three novel QTLs for adiposity on chromosome 2 with epistatic interactions: the NHLBI Family Heart Study. Obesity (Silver Spring) 17:2190-5
Gupta, Samir K; Smurzynski, Marlene; Franceschini, Nora et al. (2009) The effects of HIV type-1 viral suppression and non-viral factors on quantitative proteinuria in the highly active antiretroviral therapy era. Antivir Ther 14:543-9
Ma, Duanduan; Feitosa, Mary F; Wilk, Jemma B et al. (2009) Leptin is associated with blood pressure and hypertension in women from the National Heart, Lung, and Blood Institute Family Heart Study. Hypertension 53:473-9

Showing the most recent 10 out of 12 publications