Recent biologic and genetic studies implicate ubiquitination in the regulation of several inflammatory and cell survival pathways in inflammatory bowel diseases (IBD). IBD is manifested by mucosal ulceration, loss of the integrity of the intestinal epithelium, and inflammation of the gut mucosa. The events that lead to disruption of the intestinal barrier in IBD are incompletely understood. We have been studying a potent regulator of ubiquitin dependent signaling that is linked genetically and epigenetically to IBD, called A20 (also known as TNFAIP3). A20 is a negative regulator of NF?B that limits inflammation and restricts multiple cell death pathways. As death of intestinal epithelial cells (IECs) could compromise the intestinal barrier and contribute to IBD, in this proposal we focus on A20's role in preserving IEC survival to protect against IBD. During our investigations of A20, we observed that the expression of another ubiquitin-mediator, called ABIN-1, was increased in cells when A20 was deleted. ABIN-1 (also known as Tnip1) is also genetically linked to IBD and binds to A20. While A20 is a ubiquitin (Ub) editing enzyme, ABIN-1 binds poly-Ub chains. The functional relationship between A20 and ABIN-1 has never been studied in vivo. Our recent studies have unveiled a surprising and dramatic epistatic relationship between A20 and ABIN-1. These observations have led us to hypothesize that A20 and ABIN-1 protect against IBD by preserving survival of IECs, in addition to their ability to restrict immune cell activation. Accordingly, we propose to explore how A20 and ABIN-1 work together to maintain intestinal barrier function and homeostasis in a new mouse model in which A20 and ABIN-1 are inducibly and specifically deleted in intestinal epithelial cells. We will test how these proteins regulate cell autonomous survival pathways in intestinal organoid cultures. To understand the precise mechanisms by which A20 and ABIN-1 function, we have created several knock-in lines of mice with strategic point mutations that abrogate specific biochemical functions of A20 and ABIN-1. Using these new mouse strains, we will determine the biochemical functions of A20 and ABIN-1 that support IEC survival. The proposed studies will establish a new, inducible mouse model of IBD that will allow dissection of the physiological preservation of IEC homeostasis. The delineation of the ubiquitin controlled molecular pathways that lead to IEC death will yield mechanistic insights into how to intercede in the disease course to promote intestinal healing.

Public Health Relevance

Approximately 1.6 million Americans have inflammatory bowel diseases (IBD). IBD incidence in both western countries and previously `low risk' eastern countries is increasing, and is thus a worldwide public health concern. A20, also known as TNFAIP3, has been linked to IBD and other inflammatory diseases in human genetic studies, epigenetic studies, and experimental models. Thus, our studies investigating how A20 restricts inflammatory and cell death pathways are central to finding the underlying causes of and cures for these diseases.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
5R01DK095693-09
Application #
10111508
Study Section
Gastrointestinal Mucosal Pathobiology Study Section (GMPB)
Program Officer
Perrin, Peter J
Project Start
2012-04-01
Project End
2022-02-28
Budget Start
2021-03-01
Budget End
2022-02-28
Support Year
9
Fiscal Year
2021
Total Cost
Indirect Cost
Name
University of California San Francisco
Department
Internal Medicine/Medicine
Type
Schools of Medicine
DUNS #
094878337
City
San Francisco
State
CA
Country
United States
Zip Code
94143
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Whang, Michael I; Tavares, Rita M; Benjamin, Daniel I et al. (2017) The Ubiquitin Binding Protein TAX1BP1 Mediates Autophagasome Induction and the Metabolic Transition of Activated T Cells. Immunity 46:405-420
Ma, Averil (2015) From trash collectors to guardians of cell signaling and immune homeostasis. Immunol Rev 266:1-5
Duong, Bao H; Onizawa, Michio; Oses-Prieto, Juan A et al. (2015) A20 restricts ubiquitination of pro-interleukin-1? protein complexes and suppresses NLRP3 inflammasome activity. Immunity 42:55-67
Onizawa, Michio; Oshima, Shigeru; Schulze-Topphoff, Ulf et al. (2015) The ubiquitin-modifying enzyme A20 restricts ubiquitination of the kinase RIPK3 and protects cells from necroptosis. Nat Immunol 16:618-27
Onizawa, Michio; Oshima, Shigeru; Schulze-Topphoff, Ulf et al. (2015) Erratum: The ubiquitin-modifying enzyme A20 restricts ubiquitination of the kinase RIPK3 and protects cells from necroptosis. Nat Immunol 16:785
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Hammer, Gianna Elena; Ma, Averil (2013) Molecular control of steady-state dendritic cell maturation and immune homeostasis. Annu Rev Immunol 31:743-91
Shao, Ling; Oshima, Shigeru; Duong, Bao et al. (2013) A20 restricts wnt signaling in intestinal epithelial cells and suppresses colon carcinogenesis. PLoS One 8:e62223
Garg, Abhishek V; Ahmed, Mushtaq; Vallejo, Abbe N et al. (2013) The deubiquitinase A20 mediates feedback inhibition of interleukin-17 receptor signaling. Sci Signal 6:ra44

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