The broad objective of this proposal is to understand the role of chromatin structure in the processes of carcinogen-induced damage to DNA and its repair in human cells. Our previous studies indicate that the constraints placed upon DNA in chromatin may play an important role in the distribution of excision repair in the human genome following damage by UV radiation and """"""""UV-mimetic"""""""" chemical carcinogens. Furthermore, rearrangements of chromatin structure appear to be an obligatory final step in the excision repair process following damage by these """"""""long patch"""""""" agents. One of the objectives of the present application is to extend these studies to the repair of """"""""short patch"""""""" agents (i.e., Gamma radiation and bleomycin) in both normal human cells and human cells deficient in the repair of UV radiation and UV-mimetic agens (i.e., xeroderma pigmentosum human cells). Furthermore, we plan to carry out detailed investigations on the structure, composition and repair patch size of newly repaired regions of DNA within the chromatin of both normal and (partially) repair deficient human cells. These studies will include methods to examine the proteins directly associated with newly repaired regions of human DNA and should allow the identification of both enzymes and structural proteins involved in the repair process. These studies will also be directed at identifying similarities and differences in the protein composition of newly repaired regions in xeroderma pigmentosum human cells. Another objective of this proposal is to carry out a detailed, systematic study of the relationship of two chromatin modification events (i.e., histone acetylation and phosphorylation) and the processes of carcinogen-induced DNA damage and DNA repair in human cells. These studies will examine the levels of histone acetylation and phosphorylation in both normal and xeroderma pigmentosum human cells following treatment with the two different """"""""classes"""""""" of DNA damaging agents.

Agency
National Institute of Health (NIH)
Institute
National Institute of Environmental Health Sciences (NIEHS)
Type
Research Project (R01)
Project #
5R01ES002614-06
Application #
3249931
Study Section
Molecular Cytology Study Section (CTY)
Project Start
1980-08-01
Project End
1987-04-30
Budget Start
1985-05-01
Budget End
1986-04-30
Support Year
6
Fiscal Year
1985
Total Cost
Indirect Cost
Name
Washington State University
Department
Type
Schools of Arts and Sciences
DUNS #
041485301
City
Pullman
State
WA
Country
United States
Zip Code
99164
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Hodges, Amelia J; Gloss, Lisa M; Wyrick, John J (2017) Residues in the Nucleosome Acidic Patch Regulate Histone Occupancy and Are Important for FACT Binding in Saccharomyces cerevisiae. Genetics 206:1339-1348
Meas, Rithy; Smerdon, Michael J (2016) Nucleosomes determine their own patch size in base excision repair. Sci Rep 6:27122
Kong, Muwen; Liu, Lili; Chen, Xuejing et al. (2016) Single-Molecule Imaging Reveals that Rad4 Employs a Dynamic DNA Damage Recognition Process. Mol Cell 64:376-387
Hinz, John M; Laughery, Marian F; Wyrick, John J (2016) Nucleosomes Selectively Inhibit Cas9 Off-target Activity at a Site Located at the Nucleosome Edge. J Biol Chem 291:24851-24856
Mao, Peng; Smerdon, Michael J; Roberts, Steven A et al. (2016) Chromosomal landscape of UV damage formation and repair at single-nucleotide resolution. Proc Natl Acad Sci U S A 113:9057-62

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