The overall objective of this work is to understand the genetic mechanisms that regulate synthesis of the replication DNA polymerase of bacteriophage T4 and its interactions with other proteins of the T4 DNA replication complex. Of particular interest to us is the mechanism by which the polymerase regulates its own synthesis in vivo. We want to find out if this regulation occurs at the transcriptional or translational levels. Also, we plan to fuse different NH2-terminal segments of the structural gene for T4 DNA polymerase (T4 gene 43) to an E. coli lacZ (beta- galactosidase) gene in order to effect the synthesis of chimeric proteins that harbor activities associated with different N2H- terminal lengths of the single polypeptide (896 amino acid) T4 gene 43 product. A coupled transcription/translation cell-free assay system and purified transcription and translation assays will be used to reconstruct the mechanism of autogenous repression by T4 DNA polymerase in vitro and to localize the target site (operator) for repression. The roles of DNA polymerase accessory proteins in control of gene 43 expression will also be tested in these in vitor assays. The proposed studies may reveal that T4 DNA polymerase biosynthesis is coordinately controlled by availability of other replication proteins (global regulation of the replication complex). Once the target (operator) for gene 43 autogenous repressor is identified, it will be altered by in vitro manipulations in order to identify nucleotide residues important in recognition of the operator by T4 DNA polymerase and added corepressors. The recombinant proteins synthesized by gene 43- lacZ fusions will be characterized for in vivo properties and purified and assayed for nucleic-acid-binding and repressor activities in vitro. Antibodies will be generated to different protein segments of the T4 DNA polymerase and used for purification of and analysis of activities intrinsic to mutant peptides.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM018842-16
Application #
3269416
Study Section
Microbial Physiology and Genetics Subcommittee 2 (MBC)
Project Start
1979-04-01
Project End
1993-01-31
Budget Start
1989-02-01
Budget End
1990-01-31
Support Year
16
Fiscal Year
1989
Total Cost
Indirect Cost
Name
Medical University of South Carolina
Department
Type
Schools of Medicine
DUNS #
183710748
City
Charleston
State
SC
Country
United States
Zip Code
29425
Pavlov, A R; Karam, J D (1994) Binding specificity of T4 DNA polymerase to RNA. J Biol Chem 269:12968-72
Andrake, M D; Karam, J D (1991) Mutational analysis of the mRNA operator for T4 DNA polymerase. Genetics 128:203-13
Hsu, T; Karam, J D (1990) Transcriptional mapping of a DNA replication gene cluster in bacteriophage T4. Sites for initiation, termination, and mRNA processing. J Biol Chem 265:5303-16
Spicer, E K; Rush, J; Fung, C et al. (1988) Primary structure of T4 DNA polymerase. Evolutionary relatedness to eucaryotic and other procaryotic DNA polymerases. J Biol Chem 263:7478-86
Andrake, M; Guild, N; Hsu, T et al. (1988) DNA polymerase of bacteriophage T4 is an autogenous translational repressor. Proc Natl Acad Sci U S A 85:7942-6
Hsu, T; Wei, R X; Dawson, M et al. (1987) Identification of two new bacteriophage T4 genes that may have roles in transcription and DNA replication. J Virol 61:366-74
Hughes, M B; Yee, A M; Dawson, M et al. (1987) Genetic mapping of the amino-terminal domain of bacteriophage T4 DNA polymerase. Genetics 115:393-403