Healthy cellular activity is dependent on the proper assembly and subsequent catalytic function of key enzymes of intermediary metabolism. Our primary interest and long-term goal is to understand factors which regulate the process by which carbon dioxide is assimilated into organic compounds of the cell, a process which is common to all organisms. Primary carbon dioxide assimilation is catalyzed by the enzyme ribulose 1,5-bisphosphate (RuBP) carboxylase/oxygenase (RubisCO). This protein also has the capacity to function as an internal monooxygenase and catalyzes the oxygenolytic cleavage of RuBP under suitable conditions. RubisCO is thus a bifunctional protein in which the same polypeptide chain catalyzes the first step of two competing reactions of cellular metabolism; indeed recent studies indicate that this unique enzyme may function as an isomerase, an epimerase, and a phosphatase as well. This study is thus directed at three major areas: (1) the mechanism by which chaperonin proteins influence the folding of large (L) and small (S) subunits of L/8S/8 RubisCO; (2) the molecular basis by which RubisCO is able to discriminate between its two gaseous substrates, carbon dioxide and oxygen; and (3) the process by which the activity of RubisCO is regulated in the cell via posttranslational modification and the use of additional proteins. A system has been established for the RubisCO folding studies that will greatly enhance recent results indicating the importance of factor(s) other than known chaperonin proteins. In addition, novel selection procedures have been developed to enhance the RubisCO substrate specificity studies; thus residues and regions that influence catalysis and substrate specificity may be elucidated at a level beyond prejudicial site-directed mutagenesis procedures. Such studies will nicely enhance X-ray and structural models that have already been provided for several RubisCOs. These studies thus present an excellent opportunity to relate control of cellular metabolism to the proper folding and function of an important, yet complex oligomeric protein.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM024497-22
Application #
6018482
Study Section
Microbial Physiology and Genetics Subcommittee 2 (MBC)
Project Start
1989-01-01
Project End
2002-07-31
Budget Start
1999-08-01
Budget End
2002-07-31
Support Year
22
Fiscal Year
1999
Total Cost
Indirect Cost
Name
Ohio State University
Department
Microbiology/Immun/Virology
Type
Schools of Arts and Sciences
DUNS #
098987217
City
Columbus
State
OH
Country
United States
Zip Code
43210
Singh, Jaya; Tabita, F Robert (2010) Roles of RubisCO and the RubisCO-like protein in 5-methylthioadenosine metabolism in the Nonsulfur purple bacterium Rhodospirillum rubrum. J Bacteriol 192:1324-31
Satagopan, Sriram; Scott, Stephanie S; Smith, Todd G et al. (2009) A Rubisco mutant that confers growth under a normally ""inhibitory"" oxygen concentration. Biochemistry 48:9076-83
Imker, Heidi J; Singh, Jaya; Warlick, Benjamin P et al. (2008) Mechanistic diversity in the RuBisCO superfamily: a novel isomerization reaction catalyzed by the RuBisCO-like protein from Rhodospirillum rubrum. Biochemistry 47:11171-3
Tabita, F Robert; Hanson, Thomas E; Satagopan, Sriram et al. (2008) Phylogenetic and evolutionary relationships of RubisCO and the RubisCO-like proteins and the functional lessons provided by diverse molecular forms. Philos Trans R Soc Lond B Biol Sci 363:2629-40
Tabita, F Robert; Satagopan, Sriram; Hanson, Thomas E et al. (2008) Distinct form I, II, III, and IV Rubisco proteins from the three kingdoms of life provide clues about Rubisco evolution and structure/function relationships. J Exp Bot 59:1515-24
Tabita, F Robert; Hanson, Thomas E; Li, Huiying et al. (2007) Function, structure, and evolution of the RubisCO-like proteins and their RubisCO homologs. Microbiol Mol Biol Rev 71:576-99
Kreel, Nathaniel E; Tabita, F Robert (2007) Substitutions at methionine 295 of Archaeoglobus fulgidus ribulose-1,5-bisphosphate carboxylase/oxygenase affect oxygen binding and CO2/O2 specificity. J Biol Chem 282:1341-51
Li, Huiying; Sawaya, Michael R; Tabita, F Robert et al. (2005) Crystal structure of a RuBisCO-like protein from the green sulfur bacterium Chlorobium tepidum. Structure 13:779-89
Finn, Michael W; Tabita, F Robert (2004) Modified pathway to synthesize ribulose 1,5-bisphosphate in methanogenic archaea. J Bacteriol 186:6360-6
Smith, Stephanie A; Tabita, F Robert (2004) Glycine 176 affects catalytic properties and stability of the Synechococcus sp. strain PCC6301 ribulose-1,5-bisphosphate carboxylase/oxygenase. J Biol Chem 279:25632-7

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