The amino acid sequences of the periplasmic binding protein and the two membrane-bound transport proteins which comprise the complete dicarboxylate transporting system of E. coli will be determined using automated protein sequencing methods. The production of the membrane-bound proteins may be enhanced by amplifying the genes for the proteins using recombinant DNA techniques. The sequences of the ribose and citrate binding proteins will be completed. The sequence changes in a number of functionally defective mutant galactose and arabinose binding proteins will be determined using our new HPLC mapping procedure. The structures of the dicarboxylate transport system components will be the base from which a description of the sequence of molecular events taking place during membrane transport can be built. The data from the citrate and ribose binding protein sequences together with those from the studies on the mutant binding proteins will be compared to the sequence and X-ray structures already determined for several other binding proteins to yield a detaied structure-function analysis of these proteins. This should ultimately make it possible to delineate in chemical terms the steps by which the binding proteins interact with the membrane-bound transport systems and deliver nutrients to the cell membrane.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM024602-08
Application #
3272414
Study Section
Physiological Chemistry Study Section (PC)
Project Start
1978-04-01
Project End
1986-11-30
Budget Start
1985-04-01
Budget End
1986-11-30
Support Year
8
Fiscal Year
1985
Total Cost
Indirect Cost
Name
Purdue University
Department
Type
Earth Sciences/Resources
DUNS #
072051394
City
West Lafayette
State
IN
Country
United States
Zip Code
47907
Mauzy, C A; Hermodson, M A (1992) Structural homology between rbs repressor and ribose binding protein implies functional similarity. Protein Sci 1:843-9
Mauzy, C A; Hermodson, M A (1992) Structural and functional analyses of the repressor, RbsR, of the ribose operon of Escherichia coli. Protein Sci 1:831-42
Miller, M J; Hermodson, M; Gennis, R B (1988) The active form of the cytochrome d terminal oxidase complex of Escherichia coli is a heterodimer containing one copy of each of the two subunits. J Biol Chem 263:5235-40
Souciet, J L; Hermodson, M A; Zalkin, H (1988) Mutational analysis of the glutamine phosphoribosylpyrophosphate amidotransferase pro-peptide. J Biol Chem 263:3323-7
Xu, S; Cramer, W A; Peterson, A A et al. (1988) Dynamic properties of membrane proteins: reversible insertion into membrane vesicles of a colicin E1 channel-forming peptide. Proc Natl Acad Sci U S A 85:7531-5
Bell, A W; Buckel, S D; Groarke, J M et al. (1986) The nucleotide sequences of the rbsD, rbsA, and rbsC genes of Escherichia coli K12. J Biol Chem 261:7652-8
Hope, J N; Bell, A W; Hermodson, M A et al. (1986) Ribokinase from Escherichia coli K12. Nucleotide sequence and overexpression of the rbsK gene and purification of ribokinase. J Biol Chem 261:7663-8
Buckel, S D; Bell, A W; Rao, J K et al. (1986) An analysis of the structure of the product of the rbsA gene of Escherichia coli K12. J Biol Chem 261:7659-62
Iida, A; Groarke, J M; Park, S et al. (1985) A signal sequence mutant defective in export of ribose-binding protein and a corresponding pseudorevertant isolated without imposed selection. EMBO J 4:1875-80