We study the interaction of bacterial cells with specific eukaryotic hosts, in a system which relates both to developmental events in multicellular organisms, and to bacterial pathogenesis. Rhizobium meliloti invades and induces nodule formation in specific host plants including alfalfa (Medicago sativa). As they invade, the bacteria alter the host's cell wall synthesis, induce normally non-dividing cells to resume cell division, and stimulate new host gene expression. The bacteria also differentiate structurally and express new genes. We have identified and cloned the bacterial genes used in invasion and nodule induction. Free living bacteria have little or no RNA homologous to the nod gene fragments, suggesting they may not be transcribed in free-living cells. No protein differences were observed between wild type bacteria and transposon Tn5 induced Nod- mutants. An in-frame translational gene fusion of nodC and lacZ has been constructed and this is being used to analyze nod gene expression in various growth conditions and during infection. The DNA sequence has been determined for most of this region, and in vitro, mini-cell and maxi-cell expression has been achieved for open reading frames in the nod gene segment. Antibody is being generated to nodA which has been overexpressed in E. coli, and two synthetic peptides predicted from the DNA sequence of nodC have been constructed and coupled to carrier. We will continue our studies of nod gene expression and nod gene products by constructing further operon and gene fusions between nod genes and indicator genes lacZ, CAT, and lux. In vitro fusions will be based on the complete DNA sequence for these symbiotic genes. Random operon fusions will take advantage of Tn5 derivatives which place lacZ or CAT indicator genes under control of promoters at the insertion site. We will use gene fusions as assays for locating and mutating regulatory nodulation genes. The nod gene proteins will be produced in E. coli and purified for generating antibody, which will be used to confirm the identity of the genes, to follow gene expression in free-living growth and during infection, and to determine the cellular localization of the gene products in vivo. The timing of expression and cellular location of these gene products will provide insight into their possible function during invasion of and nodule induction in their host.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM030962-05
Application #
3278855
Study Section
Microbial Physiology and Genetics Subcommittee 2 (MBC)
Project Start
1982-07-01
Project End
1988-07-31
Budget Start
1986-08-01
Budget End
1987-07-31
Support Year
5
Fiscal Year
1986
Total Cost
Indirect Cost
Name
Stanford University
Department
Type
Schools of Arts and Sciences
DUNS #
800771545
City
Stanford
State
CA
Country
United States
Zip Code
94305
Peck, Melicent C; Fisher, Robert F; Bliss, Robert et al. (2013) Isolation and characterization of mutant Sinorhizobium meliloti NodD1 proteins with altered responses to luteolin. J Bacteriol 195:3714-23
Krol, Elizaveta; Blom, Jochen; Winnebald, Jorn et al. (2011) RhizoRegNet--a database of rhizobial transcription factors and regulatory networks. J Biotechnol 155:127-34
Becker, Anke; Barnett, Melanie J; Capela, Delphine et al. (2009) A portal for rhizobial genomes: RhizoGATE integrates a Sinorhizobium meliloti genome annotation update with postgenome data. J Biotechnol 140:45-50
Margolin, W; Bramhill, D; Long, S R (1995) The dnaA gene of Rhizobium meliloti lies within an unusual gene arrangement. J Bacteriol 177:2892-900
Margolin, W; Long, S R (1993) Isolation and characterization of a DNA replication origin from the 1,700-kilobase-pair symbiotic megaplasmid pSym-b of Rhizobium meliloti. J Bacteriol 175:6553-61
Long, S R; Staskawicz, B J (1993) Prokaryotic plant parasites. Cell 73:921-35
Rushing, B G; Yelton, M M; Long, S R (1991) Genetic and physical analysis of the nodD3 region of Rhizobium meliloti. Nucleic Acids Res 19:921-7
Barnett, M J; Long, S R (1990) DNA sequence and translational product of a new nodulation-regulatory locus: syrM has sequence similarity to NodD proteins. J Bacteriol 172:3695-700
Fisher, R F; Long, S R (1989) DNA footprint analysis of the transcriptional activator proteins NodD1 and NodD3 on inducible nod gene promoters. J Bacteriol 171:5492-502
Long, S R (1989) Rhizobium-legume nodulation: life together in the underground. Cell 56:203-14

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