In the previous granting period, we developed techniques to use synthetic oligodeoxyribonucleotides as probes for the isolation of cloned DNAs coding for proteins of or related to the MHC. We have isolated a cDNA clone for human Beta2m and several cDNA clones for H2 class I antigens, including one clone coding for an H-2Kb related molecule. In this grant we propose to extend our efforts to the isolation of cloned DNAs (both cDNA and genomic DNA) of class I and class II antigens. The specific objectives are: 1. Isolate and completely sequence cDNA clones for several class I antigens to gain insight into the distribution of the polymorphic sites in the polypeptide chain. This is much more easily done by DNA sequencing than by protein sequencing (see Progress Report). 2. To isolate cDNA clones for murine Ia antigens using, as probes, clones isolated for human DR and IA antigens in collaboration with Drs. K. Itakura, J. Shively, and J. Silver. 3. To isolate genomic clones for class I and II antigens for which cDNA clones have already been obtained. 4. To isolate and sequence genomic nes for H2-Kb and various mutant alleles to help in understanding the very high mutation frequency in H2 genes. 5. To establish an in vivo assay in which phenotypic effects of in vitro generated mutations of cloned H2 genes can be assessed.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM031261-05
Application #
3279198
Study Section
Mammalian Genetics Study Section (MGN)
Project Start
1981-08-01
Project End
1987-07-31
Budget Start
1985-04-01
Budget End
1986-07-31
Support Year
5
Fiscal Year
1985
Total Cost
Indirect Cost
Name
City of Hope/Beckman Research Institute
Department
Type
DUNS #
City
Duarte
State
CA
Country
United States
Zip Code
91010
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Mann, D W; McLaughlin-Taylor, E; Wallace, R B et al. (1988) An immunodominant epitope present in multiple class I MHC molecules and recognized by cytotoxic T lymphocytes. J Exp Med 168:307-24
Reyes, A A; Wallace, R B (1987) Mapping of RNA using S1 nuclease and synthetic oligonucleotides. Methods Enzymol 154:87-94
Miyada, C G; Wallace, R B (1987) Oligonucleotide hybridization techniques. Methods Enzymol 154:94-107
Wallace, R B; Miyada, C G (1987) Oligonucleotide probes for the screening of recombinant DNA libraries. Methods Enzymol 152:432-42
Miyada, C G; Wallace, R B (1986) Liver-specific expression of a Qa-encoded class I gene is associated with DNA hypomethylation. Mol Cell Biol 6:315-7
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Rinaldy, A; Wallace, R B; Simon, M M et al. (1985) A highly homologous T-cell receptor beta-chain variable region is expressed in mouse and human T cells. Immunogenetics 21:403-6
Miyada, C G; Klofelt, C; Reyes, A A et al. (1985) Evidence that polymorphism in the murine major histocompatibility complex may be generated by the assortment of subgene sequences. Proc Natl Acad Sci U S A 82:2890-4
Wallace, R B; Studencki, A B; Murasugi, A (1985) Application of synthetic oligonucleotides to the diagnosis of human genetic diseases. Biochimie 67:755-62