The aim of the research described in this proposal is to understand the molecular basis of spontaneous mutations caused by transposable elements and the mechanisms whereby mutations at unlinked suppressor loci reverse the phenotype of these spontaneous mutants. We will study mutations at the Drosophila yellow and forked loci, caused by the insertion of the gypsy element, which are suppressed by mutations at the suppressor of Hairy-wing and/or suppressor of forked loci. Preliminary results suggest that the transcriptional activity of the gypsy element is important in causing the mutation and in mediating the phenomenon of suppression. This hypothesis will be tested by analyzing the mutagenic effect of in vitro-altered gypsy elements introduced into the Drosophila germline by P element-mediated transformation; this mutagenic effect will be correlated with the pattern of transcription of the altered element in normal and suppressed flies. In addition, the su(Hw) and su(f) loci will be isolated and characterized. Two different strategies will be used to clone the su(Hw) locus. The first one will involve the use of hybrid dysgenesis to isolate a P-induced allele; the second approach will involve chromosomal walking from a cDNA clone located at 88B1. In order to isolate the su(f) locus we will take advantage of an allele caused by the insertion of the gypsy element. Once the suppressor loci have been isolated the protein products they encode will be identified and their interaction with the gypsy element will be analyzed using in vitro systems to test hypothesis on the molecular mechanisms by which suppression takes place.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM035463-05
Application #
3288269
Study Section
Genetics Study Section (GEN)
Project Start
1986-04-01
Project End
1991-03-31
Budget Start
1990-04-01
Budget End
1991-03-31
Support Year
5
Fiscal Year
1990
Total Cost
Indirect Cost
Name
Johns Hopkins University
Department
Type
Schools of Arts and Sciences
DUNS #
045911138
City
Baltimore
State
MD
Country
United States
Zip Code
21218
Rowley, M Jordan; Corces, Victor G (2018) Organizational principles of 3D genome architecture. Nat Rev Genet 19:789-800
Nichols, Michael H; Corces, Victor G (2018) A tethered-inchworm model of SMC DNA translocation. Nat Struct Mol Biol 25:906-910
Xu, Chenhuan; Corces, Victor G (2018) Genome-Wide Mapping of Protein-DNA Interactions on Nascent Chromatin. Methods Mol Biol 1766:231-238
Lyu, Xiaowen; Rowley, M Jordan; Corces, Victor G (2018) Architectural Proteins and Pluripotency Factors Cooperate to Orchestrate the Transcriptional Response of hESCs to Temperature Stress. Mol Cell 71:940-955.e7
Ando-Kuri, Masami; Rivera, I Sarahi M; Rowley, M Jordan et al. (2018) Analysis of Chromatin Interactions Mediated by Specific Architectural Proteins in Drosophila Cells. Methods Mol Biol 1766:239-256
Arzate-Mejía, Rodrigo G; Recillas-Targa, Félix; Corces, Victor G (2018) Developing in 3D: the role of CTCF in cell differentiation. Development 145:
Rowley, M Jordan; Nichols, Michael H; Lyu, Xiaowen et al. (2017) Evolutionarily Conserved Principles Predict 3D Chromatin Organization. Mol Cell 67:837-852.e7
Hashimoto, Hideharu; Wang, Dongxue; Horton, John R et al. (2017) Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA. Mol Cell 66:711-720.e3
Jung, Yoon Hee; Sauria, Michael E G; Lyu, Xiaowen et al. (2017) Chromatin States in Mouse Sperm Correlate with Embryonic and Adult Regulatory Landscapes. Cell Rep 18:1366-1382
Gómez-Díaz, Elena; Yerbanga, Rakiswendé S; Lefèvre, Thierry et al. (2017) Epigenetic regulation of Plasmodium falciparum clonally variant gene expression during development in Anopheles gambiae. Sci Rep 7:40655

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