Flavoproteins constitute one of the largest groups of functionall related proteins currently known, catalyzing essential oxidation/reduction steps in almost every metabolic pathway in both prokaryotic and eukaryotic cells. Using essentially the same riboflavin-based cofactor, flavoproteins participate in a remarkable array of biological processes, from simple electro transfer to complex signal transduction pathways. Flavoproteins are also uniqu in facilitating electron transfer between obligatory one- and two-electron donor and acceptor molecules such as between pyridine nucleotides and heme-containing proteins. It is not surprising, then, that defects within thes critical electron transfer processes may manifest themselves in severe, and sometimes fatal, metabolic diseases. The principal long term goal of this research is to understand more thoroughly the fundamental factors that control or modulate the oxidation-reduction properties and chemical reactivity of the bound flavin cofactor in these proteins. Our efforts are primarily focused on the role of specific molecular interactions between cofactor and proteinCboth short and long rangeCand protein conformational changes in the regulation (of) the oxidation-reduction potentials of the flavin, a central factor in electron transfer and reactivity. A secondary research goal is the evaluation of protei structural features that are crucial in facilitating electron transfer by way of the flavin cofactor between redox centers/proteins. The flavodoxin has been our principal model system of study and may serve as one paradigm for FMN-binding domains in complex flavoproteins such as cytochrome P450 reductase and nitric oxide synthase. These flavoproteins catalyze important reactions in fatty acid metabolism; xenobiotic, steroid and prostaglandin biosynthesis; and in neurotransmission. Blood pressure homeostasis, and inflammatory responses. second system under study, the electron transfer flavoprotein, provides a different type of flavin binding site with unique structure and properties distinct from the flavodoxin. This proposal describes the continuation of the development of a biochemical model and underlying concepts for the regulation of the reduction potentials and, secondarily, electron transfer in the flavodoxin and the electron transfer flavoprotein, ultimately leading to a greater general understanding of these processes in other flavoproteins.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM036490-09
Application #
6018663
Study Section
Physical Biochemistry Study Section (PB)
Project Start
1988-12-01
Project End
2002-07-31
Budget Start
1999-08-01
Budget End
2000-07-31
Support Year
9
Fiscal Year
1999
Total Cost
Indirect Cost
Name
Ohio State University
Department
Biochemistry
Type
Schools of Arts and Sciences
DUNS #
098987217
City
Columbus
State
OH
Country
United States
Zip Code
43210
Kasim, Mumtaz; Chen, Huai-Chun; Swenson, Richard P (2009) Functional characterization of the re-face loop spanning residues 536-541 and its interactions with the cofactor in the flavin mononucleotide-binding domain of flavocytochrome P450 from Bacillus megaterium. Biochemistry 48:5131-41
Murray, Tracey Arnold; Swenson, Richard P (2003) Mechanism of flavin mononucleotide cofactor binding to the Desulfovibrio vulgaris flavodoxin. 1. Kinetic evidence for cooperative effects associated with the binding of inorganic phosphate and the 5'-phosphate moiety of the cofactor. Biochemistry 42:2307-16
Murray, Tracey Arnold; Foster, Mark P; Swenson, Richard P (2003) Mechanism of flavin mononucleotide cofactor binding to the Desulfovibrio vulgaris flavodoxin. 2. Evidence for cooperative conformational changes involving tryptophan 60 in the interaction between the phosphate- and ring-binding subsites. Biochemistry 42:2317-27
Bradley, L H; Swenson, R P (2001) Role of hydrogen bonding interactions to N(3)H of the flavin mononucleotide cofactor in the modulation of the redox potentials of the Clostridium beijerinckii flavodoxin. Biochemistry 40:8686-95
Kasim, M; Swenson, R P (2001) Alanine-scanning of the 50's loop in the Clostridium beijerinckii flavodoxin: evaluation of additivity and the importance of interactions provided by the main chain in the modulation of the oxidation-reduction potentials. Biochemistry 40:13548-55
Kasim, M; Swenson, R P (2000) Conformational energetics of a reverse turn in the Clostridium beijerinckii flavodoxin is directly coupled to the modulation of its oxidation-reduction potentials. Biochemistry 39:15322-32
Bradley, L H; Swenson, R P (1999) Role of glutamate-59 hydrogen bonded to N(3)H of the flavin mononucleotide cofactor in the modulation of the redox potentials of the Clostridium beijerinckii flavodoxin. Glutamate-59 is not responsible for the pH dependency but contributes to the stabiliz Biochemistry 38:12377-86
Chang, F C; Swenson, R P (1999) The midpoint potentials for the oxidized-semiquinone couple for Gly57 mutants of the Clostridium beijerinckii flavodoxin correlate with changes in the hydrogen-bonding interaction with the proton on N(5) of the reduced flavin mononucleotide cofactor as me Biochemistry 38:7168-76
Druhan, L J; Swenson, R P (1998) Role of methionine 56 in the control of the oxidation-reduction potentials of the Clostridium beijerinckii flavodoxin: effects of substitutions by aliphatic amino acids and evidence for a role of sulfur-flavin interactions. Biochemistry 37:9668-78
Feng, Y; Swenson, R P (1997) Evaluation of the role of specific acidic amino acid residues in electron transfer between the flavodoxin and cytochrome c3 from Desulfovibrio vulgaris. Biochemistry 36:13617-28

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