The preparation of a high-resolution, physical map of the human genome is one of the current challenges of molecular genetics today. The overall approaches and the methodologies to complete this task have been developed to some extent, but few mapping strategies have gone from model systems to actual genomic mapping. We propose here to 1) develop the technology necessary to perform this task. 2) implement its use by preparing a map of a limited region of the genome and 3) investigate the application of this map to problems in human genetics. We will concentrate on the improvement of techniques for the production of libraries containing clones localized to the region of interest, and on the implementation of novel restriction cleavage strategies that pro- duce a physical map of the long arm of chromosome 5 at 300-kb resolution. The map will consist of unique probes of known order and distance that have been linked by megabase restriction mapping. Emphasis will be placed on bands 5423-31, an area of biomedical significance, containing genes that are involved in mutagen-induced leukemia. Lastly, we will investigate the use of the physical map to identify structural alterations in the human genome, addressing questions about the general reproducibility of this map from individual to individual, and the use of this map to identify translocations at 5q31 in the cells of patients with leukemia.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
1R01GM040882-01
Application #
3298793
Study Section
(SRC)
Project Start
1988-09-29
Project End
1991-08-31
Budget Start
1988-09-29
Budget End
1989-08-31
Support Year
1
Fiscal Year
1988
Total Cost
Indirect Cost
Name
University of Chicago
Department
Type
Schools of Medicine
DUNS #
225410919
City
Chicago
State
IL
Country
United States
Zip Code
60637
Thangavelu, M; Neuman, W L; Espinosa 3rd, R et al. (1992) A physical and genetic linkage map of the distal long arm of human chromosome 5. Cytogenet Cell Genet 59:27-30
Anastasi, J; Le Beau, M M; Vardiman, J W et al. (1990) Detection of numerical chromosomal abnormalities in neoplastic hematopoietic cells by in situ hybridization with a chromosome-specific probe. Am J Pathol 136:131-9
Chandrasekharappa, S C; Rebelsky, M S; Firak, T A et al. (1990) A long-range restriction map of the interleukin-4 and interleukin-5 linkage group on chromosome 5. Genomics 6:94-9