Biochemical and genetic approaches will be used to study actin assembly in yeast. The principles established from these studies are likely to apply to more complex eukaryotes where actin dynamics underlie many motile processes and where defective cytoskeleton function contributes to conditions such as muscular dystrophy, certain hereditary anemias, and cancer. The following questions will be addressed (1) What is the relationship between actin structure and actin function? The development of atomic models for the actin monomer and filament provide an opportunity to bring our understanding of the function and regulation of the actin cytoskeleton to a new level. Interaction sites on actin and the orientation of the monomers within the filament model will be tested using an existing collection of 36 actin mutations. A systematic mutagenesis of actin residues implicated in nucleotide binding will be performed to identify mutants with altered nucleotide hydrolysis or exchange rates. These mutations will test the importance of nucleotide exchange and hydrolysis in vivo, and will be used to genetically identify factors that regulate these reactions. (2) What are the functions of the actin-binding protein cofilin, and what is the relationship between cofilin structure and cofilin function? A synoptic set of 15 charged-to-alanine mutations will be isolated in the gene encoding the multi-functional actin-binding protein cofilin and the biochemical and physiological effects will be determined. A collaboration aimed at developing an atomic model of yeast cofilin will be initiated. In total, this will be the most comprehensive in vivo and in vitro study of the structure and function of an actin-binding protein performed to date. (3) How are the activities of the actin-binding proteins cofilin and profilin regulated? The regulatory mechanisms that control the dynamic actin reorganizations that underlie such varied processes as blood clotting and phagocytosis have not been elucidated. Since profilin and cofilin are likely to play central roles in regulating actin dynamics, genetic strategies will be employed to identify regulators of these proteins. Genes that, at increased or decreased dosage, result in an inviability that can be suppressed by overproduction of cofilin or profilin will be isolated. Positive or negative regulators of cofilin or profilin might be among the proteins encoded by these genes. The functions of these proteins will be studies genetically.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM042759-09
Application #
2444734
Study Section
Cellular Biology and Physiology Subcommittee 1 (CBY)
Project Start
1989-07-01
Project End
1998-06-30
Budget Start
1997-07-01
Budget End
1998-06-30
Support Year
9
Fiscal Year
1997
Total Cost
Indirect Cost
Name
University of California Berkeley
Department
Biochemistry
Type
Schools of Arts and Sciences
DUNS #
094878337
City
Berkeley
State
CA
Country
United States
Zip Code
94704
Lu, Rebecca; Drubin, David G; Sun, Yidi (2016) Clathrin-mediated endocytosis in budding yeast at a glance. J Cell Sci 129:1531-6
Miao, Yansong; Han, Xuemei; Zheng, Liangzhen et al. (2016) Fimbrin phosphorylation by metaphase Cdk1 regulates actin cable dynamics in budding yeast. Nat Commun 7:11265
Sun, Yidi; Leong, Nicole T; Wong, Tiffany et al. (2015) A Pan1/End3/Sla1 complex links Arp2/3-mediated actin assembly to sites of clathrin-mediated endocytosis. Mol Biol Cell 26:3841-56
Lewellyn, Eric B; Pedersen, Ross T A; Hong, Jessica et al. (2015) An Engineered Minimal WASP-Myosin Fusion Protein Reveals Essential Functions for Endocytosis. Dev Cell 35:281-94
Cortesio, Christa L; Lewellyn, Eric B; Drubin, David G (2015) Control of lipid organization and actin assembly during clathrin-mediated endocytosis by the cytoplasmic tail of the rhomboid protein Rbd2. Mol Biol Cell 26:1509-22
Michelot, Alphée; Drubin, David G (2014) Dissecting principles governing actin assembly using yeast extracts. Methods Enzymol 540:381-97
Weinberg, Jasper S; Drubin, David G (2014) Regulation of clathrin-mediated endocytosis by dynamic ubiquitination and deubiquitination. Curr Biol 24:951-9
Michelot, Alphée; Grassart, Alexandre; Okreglak, Voytek et al. (2013) Actin filament elongation in Arp2/3-derived networks is controlled by three distinct mechanisms. Dev Cell 24:182-95
Miao, Yansong; Wong, Catherine C L; Mennella, Vito et al. (2013) Cell-cycle regulation of formin-mediated actin cable assembly. Proc Natl Acad Sci U S A 110:E4446-55
Weinberg, Jasper; Drubin, David G (2012) Clathrin-mediated endocytosis in budding yeast. Trends Cell Biol 22:1-13

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