Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
1R01GM054250-01
Application #
2193640
Study Section
Molecular and Cellular Biophysics Study Section (BBCA)
Project Start
1996-05-01
Project End
2000-04-30
Budget Start
1996-05-01
Budget End
1997-04-30
Support Year
1
Fiscal Year
1996
Total Cost
Indirect Cost
Name
Washington University
Department
Type
Other Domestic Higher Education
DUNS #
062761671
City
Saint Louis
State
MO
Country
United States
Zip Code
63130
Ragan, Chikako; Zuker, Michael; Ragan, Mark A (2011) Quantitative prediction of miRNA-mRNA interaction based on equilibrium concentrations. PLoS Comput Biol 7:e1001090
Ragan, Chikako; Cloonan, Nicole; Grimmond, Sean M et al. (2009) Transcriptome-wide prediction of miRNA targets in human and mouse using FASTH. PLoS One 4:e5745
Markham, Nicholas R; Zuker, Michael (2008) UNAFold: software for nucleic acid folding and hybridization. Methods Mol Biol 453:3-31
Markham, Nicholas R; Zuker, Michael (2005) DINAMelt web server for nucleic acid melting prediction. Nucleic Acids Res 33:W577-81
Mathews, David H; Disney, Matthew D; Childs, Jessica L et al. (2004) Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure. Proc Natl Acad Sci U S A 101:7287-92
Dimitrov, Roumen A; Zuker, Michael (2004) Prediction of hybridization and melting for double-stranded nucleic acids. Biophys J 87:215-26
Zuker, Michael (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31:3406-15
Rouillard, Jean-Marie; Zuker, Michael; Gulari, Erdogan (2003) OligoArray 2.0: design of oligonucleotide probes for DNA microarrays using a thermodynamic approach. Nucleic Acids Res 31:3057-62
Kidd-Ljunggren, K; Zuker, M; Hofacker, I L et al. (2000) The hepatitis B virus pregenome: prediction of RNA structure and implications for the emergence of deletions. Intervirology 43:154-64
Zuker, M (2000) Calculating nucleic acid secondary structure. Curr Opin Struct Biol 10:303-10

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