? Apoptosis is a highly controlled, universal cellular suicide process of cells. Dysregulation of apoptosis has been linked to several diseases such as cancer, Alzheimers disease and Huntington's chorea. The process of apoptosis induces initial alterations in translation regulation followed by overt shutoff that may be required for the completion of cellular suicide. These changes in translation regulation are mediated by a complex series of caspase cleavages of certain initiation factors combined with phosphorylation of other regulatory factors. The individual modifications of factors which have been described are expected to result in complex changes in function, but for most factors the functional consequences are not yet clear. The challenge before us is to determine how the covalent modification of multiple factors results in changes in function in translation. We hypothesize that cell stress causes initial changes in translation initiation factors which favor capindependent translation of mRNAs containing IRES elements. Our research will focus on factors which control selection of the specific mRNAs that can compete for ribosomes. We will determine if specific classes of IRES elements respond differentially to stress-induced modifications in translation factors. We will isolate the functional effect of caspase-cleavage of the four initiation factors independently and test the effect on translational efficiency of specific mRNAs. This investigation will focus on eIF4G, 4E-BP1 which regulate mRNA selection and eIF4B, which likely functions in 5'-3' interactions in ribosome re-cycling. We have also isolated four new IRES elements which control synthesis of the anti-apoptotic proteins Bcl-2, BcI- 10, clAP1 and clAP2. We will characterize the cis-acting RNA regulatory elements in the 5' UTRs of two of these mRNAs, Bc1-2 and clAP-1, and determine how they variably control synthesis of anti-apoptotic proteins in response to different types of cell stress. The long term goal is to understand how translation factor modification can influence cell death and further our basic understanding of how protein synthesis is regulated in human cells. ? ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM059803-08
Application #
7271851
Study Section
Physiological Chemistry Study Section (PC)
Program Officer
Tompkins, Laurie
Project Start
1999-08-01
Project End
2009-08-31
Budget Start
2007-09-01
Budget End
2009-08-31
Support Year
8
Fiscal Year
2007
Total Cost
$305,790
Indirect Cost
Name
Baylor College of Medicine
Department
Microbiology/Immun/Virology
Type
Schools of Medicine
DUNS #
051113330
City
Houston
State
TX
Country
United States
Zip Code
77030
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Dougherty, Jonathan D; White, James P; Lloyd, Richard E (2011) Poliovirus-mediated disruption of cytoplasmic processing bodies. J Virol 85:64-75
Bonderoff, Jennifer M; Lloyd, Richard E (2010) Time-dependent increase in ribosome processivity. Nucleic Acids Res 38:7054-67
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Byrd, Marshall P; Zamora, Miguel; Lloyd, Richard E (2005) Translation of eukaryotic translation initiation factor 4GI (eIF4GI) proceeds from multiple mRNAs containing a novel cap-dependent internal ribosome entry site (IRES) that is active during poliovirus infection. J Biol Chem 280:18610-22
Marissen, W E; Triyoso, D; Younan, P et al. (2004) Degradation of poly(A)-binding protein in apoptotic cells and linkage to translation regulation. Apoptosis 9:67-75
Graham, Kareem L; Gustin, Kurt E; Rivera, Carlos et al. (2004) Proteolytic cleavage of the catalytic subunit of DNA-dependent protein kinase during poliovirus infection. J Virol 78:6313-21

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