Small ubiquitin related modifiers (SUMOs) function as posttranslational protein modifications and thereby regulate nearly all essential cell functions. As such, sumoylation is linked to a variety of human diseases, including cancer and neurodegenerative disorders, and there is great interest in targeting the SUMO pathway for therapeutic purposes. Notably, the first phase I clinical trial of a SUMO inhibitor was recently approved for cancer therapy. A more detailed understanding of basic molecular mechanisms regulating sumoylation and its consequences on cell function, however, is needed to achieve the full potential of these efforts. In particular, an ability to target specific branches of the SUMO pathway could allow for more precise therapies. Vertebrates express multiple SUMO paralogs which could allow for such precision targeting. However, the unique properties and functions of SUMO paralogs remain poorly understood. To address this gap in knowledge, we are taking advantage of recently developed SUMO1 and SUMO2 knockout cell lines to define and characterize the specific functions and molecular mechanisms of action of these two paralogs.
Aims of our proposal include: (1) We will obtain support for the hypothesis that SUMO1 and SUMO2 function as unique signals specifying unique fates upon conjugation to proteins. This will be achieved through detailed characterization of paralog-specific phenotypes identified in SUMO1 and SUMO2 knockout cell lines, including changes in cell morphology, defects in proteostasis and hypersensitivities to cell stress. (2) We will test multiple hypotheses to reveal the molecular basis for non-redundant functions of SUMO1 and SUMO2. Hypotheses concerning the function of chain formation and selective non-covalent interactions with effector proteins will be explored through rescue of knockout cell phenotypes using a panel of SUMO1 and SUMO2 mutant proteins. (3) We will use proteomic and transcriptomic studies to connect the non-redundant functions of SUMO1 and SUMO2 to paralog-specific changes in gene expression, target protein modification and association with interacting effector proteins. Results from our studies will provide unequivocal evidence for SUMO1 an SUMO2 paralog- specific functions and vital insights required to target specific branches of the SUMO pathway for therapeutic purposes.

Public Health Relevance

Small ubiquitin related modifiers (SUMOs) function as posttranslational protein modifications and thereby regulate nearly all essential cell functions. As such, sumoylation is linked to a variety of human diseases, including cancer and neurodegenerative disorders, and there is great potential for targeting the SUMO pathway for therapeutic purposes. Our proposed studies will provide functional and mechanistic insights into differences between SUMO1 and SUMO2 paralogs expressed in human cells that will reveal unique contributions to health and disease and make it possible to target distinct branches of the SUMO pathway for more precise therapies.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
2R01GM060980-18
Application #
10051917
Study Section
Cellular Signaling and Regulatory Systems Study Section (CSRS)
Program Officer
Phillips, Andre W
Project Start
2000-03-01
Project End
2024-07-31
Budget Start
2020-09-01
Budget End
2021-07-31
Support Year
18
Fiscal Year
2020
Total Cost
Indirect Cost
Name
Johns Hopkins University
Department
Biochemistry
Type
Schools of Public Health
DUNS #
001910777
City
Baltimore
State
MD
Country
United States
Zip Code
21205
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Lee, Christine C; Li, Bing; Yu, Hongtao et al. (2018) Sumoylation promotes optimal APC/C Activation and Timely Anaphase. Elife 7:
Lee, Christine C; Li, Bing; Yu, Hongtao et al. (2018) A Method for SUMO Modification of Proteins in vitro. Bio Protoc 8:
Uzoma, Ijeoma; Hu, Jianfei; Cox, Eric et al. (2018) Global Identification of Small Ubiquitin-related Modifier (SUMO) Substrates Reveals Crosstalk between SUMOylation and Phosphorylation Promotes Cell Migration. Mol Cell Proteomics 17:871-888
Cox, Eric; Hwang, Woochang; Uzoma, Ijeoma et al. (2017) Global Analysis of SUMO-Binding Proteins Identifies SUMOylation as a Key Regulator of the INO80 Chromatin Remodeling Complex. Mol Cell Proteomics 16:812-823
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Lombardi, Patrick M; Matunis, Michael J; Wolberger, Cynthia (2017) RAP80, ubiquitin and SUMO in the DNA damage response. J Mol Med (Berl) 95:799-807
Reiter, Katherine H; Ramachandran, Anita; Xia, Xue et al. (2016) Characterization and Structural Insights into Selective E1-E2 Interactions in the Human and Plasmodium falciparum SUMO Conjugation Systems. J Biol Chem 291:3860-70
Lee, Christine C; Matunis, Michael J (2016) Resolving Chromatin Bridges With SIMs, SUMOs and PICH. Cell Cycle 15:2547-2548
McLaughlin, Dylan; Coey, Christopher T; Yang, Wei-Chih et al. (2016) Characterizing Requirements for Small Ubiquitin-like Modifier (SUMO) Modification and Binding on Base Excision Repair Activity of Thymine-DNA Glycosylase in Vivo. J Biol Chem 291:9014-24

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