A principal goal of Structural Genomics is to obtain structural models for all proteins. Realization of this objective will require the development of strategies for the optimum selection of which structures are to be studied experimentally, and the development of effective, community wide, information exchange tools. The work proposed addresses these needs in four specific areas: 1) Develop criteria for target selection. A wide range of functional and structural attributes will be calculated for all currently known protein families and individual sequences. These data will provide the basis for informed selection of targets for structure determination. 2) Provide lists of possible targets, based on specific criteria. 3) Investigate the number of new experimental structures that are needed to allow models of a specified quality to be constructed for all remaining protein domains. 4) Establish and maintain a web based information resource (Genome3D). Data on family and sequence attributes as well as ongoing experimental work are to be made available through a fully searchable relational database. Tools will be provided for the selection of targets meeting particular requirements, for the registration of work in progress, and for the input of suggestions and annotation by the end user.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
7R01GM061891-02
Application #
6525952
Study Section
Special Emphasis Panel (ZRG1-SSS-A (01))
Program Officer
Edmonds, Charles G
Project Start
2001-09-01
Project End
2003-08-31
Budget Start
2002-09-01
Budget End
2003-08-31
Support Year
2
Fiscal Year
2002
Total Cost
$115,991
Indirect Cost
Name
Sloan-Kettering Institute for Cancer Research
Department
Type
DUNS #
064931884
City
New York
State
NY
Country
United States
Zip Code
10065