Our goal is to understand the biophysical mechanisms that control cell movement. Directed cell motility is essential for development, axon guidance, immune response, wound healing, and metastatic cancer. Understanding how to modulate this basic process will aid in the treatment of a host of diseases. External signals are processed by a guidance system that subsequently engages the actin polymerization machinery to drive local membrane protrusion. We focus on the signaling proteins that make up this guidance system. Most of these signaling molecules display complex allosteric regulation. For example, the neuronal Wiskott- Aldrich Syndrome Protein (N-WASP) stimulates actin filament nucleation by the Actin-related protein (Arp) 2/3 complex, but only when activated by the proper combination of upstream signaling inputs. N-WASP is also the point of attack by several bacterial pathogens that hijack the host cytoskeleton. Thus N-WASP and related proteins are critical control nodes in motility. Previously, we have studied how N-WASP functions as an complex allosteric switch. Our current aims are to: 1) Elucidate how pathogen proteins subvert N-WASP activity. We will study the structure and interactions of two pathogenic activators: the Shigella flexneri protein Ics A and the Enterohemorrhagic E. coli (EHEC) protein EspFu. 2) Elucidate the mechanism of allosteric control of guanine nucleotide exchange factors (GEFs) upstream of N-WASP. N-WASP and the related molecules are activated by Rho family GTPases, which are in turn controlled by specific GEFs. We will focus on the mechanism of regulation of two GEFs: Intersectin, which plays a key role in actin-mediated endocytosis; and P-Rex1, which plays a key role in neutrophil chemotaxis. 3) Engineer signaling switches that control actin polymerization in vivo. Our previous work suggests that protein domains can be used as building blocks to assemble signaling proteins with a variety of allosteric input/output behaviors. We have used this strategy to reprogram input control of N-WASP. We will extend these studies by attempting to reprogram other signaling molecules (specifically as GEF's) and testing if such engineered switches can be used to control actin polymerization in vivo and as tools to systematically dissect and perturb guidance circuits. ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM062583-07
Application #
7417424
Study Section
Cell Structure and Function (CSF)
Program Officer
Deatherage, James F
Project Start
2001-02-01
Project End
2010-04-30
Budget Start
2008-05-01
Budget End
2009-04-30
Support Year
7
Fiscal Year
2008
Total Cost
$299,873
Indirect Cost
Name
University of California San Francisco
Department
Pharmacology
Type
Schools of Medicine
DUNS #
094878337
City
San Francisco
State
CA
Country
United States
Zip Code
94143
Gordley, Russell M; Williams, Reid E; Bashor, Caleb J et al. (2016) Engineering dynamical control of cell fate switching using synthetic phospho-regulons. Proc Natl Acad Sci U S A 113:13528-13533
Mitchell, Amir; Wei, Ping; Lim, Wendell A (2015) Oscillatory stress stimulation uncovers an Achilles' heel of the yeast MAPK signaling network. Science 350:1379-83
Youk, Hyun; Lim, Wendell A (2014) Sending mixed messages for cell population control. Cell 158:973-975
Youk, Hyun; Lim, Wendell A (2014) Secreting and sensing the same molecule allows cells to achieve versatile social behaviors. Science 343:1242782
Park, Jason S; Rhau, Benjamin; Hermann, Aynur et al. (2014) Synthetic control of mammalian-cell motility by engineering chemotaxis to an orthogonal bioinert chemical signal. Proc Natl Acad Sci U S A 111:5896-901
Puchner, Elias M; Walter, Jessica M; Kasper, Robert et al. (2013) Counting molecules in single organelles with superresolution microscopy allows tracking of the endosome maturation trajectory. Proc Natl Acad Sci U S A 110:16015-20
Toettcher, Jared E; Weiner, Orion D; Lim, Wendell A (2013) Using optogenetics to interrogate the dynamic control of signal transmission by the Ras/Erk module. Cell 155:1422-34
Chau, Angela H; Walter, Jessica M; Gerardin, Jaline et al. (2012) Designing synthetic regulatory networks capable of self-organizing cell polarization. Cell 151:320-32
Beltrao, Pedro; Albanèse, Véronique; Kenner, Lillian R et al. (2012) Systematic functional prioritization of protein posttranslational modifications. Cell 150:413-25
Zalatan, Jesse G; Coyle, Scott M; Rajan, Saravanan et al. (2012) Conformational control of the Ste5 scaffold protein insulates against MAP kinase misactivation. Science 337:1218-22

Showing the most recent 10 out of 23 publications