Eukaryotic cells possess multiple repair/tolerance pathways that deal with DNA damage in an """"""""error free"""""""" manner that maintains the integrity of the original DNA sequence. If damage escapes these pathways, however, it can be bypassed by an """"""""error prone"""""""" mechanism in which a low fidelity translesion polymerase inserts a nucleotide opposite a noncoding lesion. This latter type of pathway is mutagenic, and is responsible not only for virtually all mutations induced by environmental mutagens, but also for a substantial fraction of mutations that arise spontaneously. This project will use the yeast Saccharomyces cerevisiae as a model to examine the role of the Pol zetu translesion polymerase in both spontaneous and induced mutagenesis. Use will be made of a novel """"""""signature"""""""" for Pol zetu translesion synthesis activity that has been identified using a frameshift-specific mutation assay. This signature is comprised of complex mutations in which the selected frameshift mutation is accompanied by one or more nonselected base substitution mutations. The frameshift-specific assay will be used to further explore the inter-relationships between the Pol zetu translesion pathway and other DNA damage repair/tolerance pathways in yeast. Both spontaneous mutations as well as mutations induced by common environmental mutagens will be examined. In addition, the mechanism for the generation of Pol zetu-dependent complex mutations will be investigated by molecular manipulation of a defined hotspot for complex events. Finally, in order to determine whether multiple base substitutions are a general feature of Pol zetu translesion synthesis, an assay will be developed that can specifically detect multiple base substitutions that arise in the absence of a frameshift mutation. The proposed studies will elucidate basic mechanisms of spontaneous and induced mutagenesis, and so are relevant to the accumulation of multiple mutations during tumorigenesis.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM064769-04
Application #
6839971
Study Section
Radiation Study Section (RAD)
Program Officer
Portnoy, Matthew
Project Start
2002-01-01
Project End
2006-02-28
Budget Start
2005-01-01
Budget End
2006-02-28
Support Year
4
Fiscal Year
2005
Total Cost
$197,600
Indirect Cost
Name
Emory University
Department
Biology
Type
Schools of Arts and Sciences
DUNS #
066469933
City
Atlanta
State
GA
Country
United States
Zip Code
30322
Brandão, Luis N; Ferguson, Rebecca; Santoro, Irma et al. (2014) The role of Dbf4-dependent protein kinase in DNA polymerase ?-dependent mutagenesis in Saccharomyces cerevisiae. Genetics 197:1111-22
Kozmin, Stanislav G; Jinks-Robertson, Sue (2013) The mechanism of nucleotide excision repair-mediated UV-induced mutagenesis in nonproliferating cells. Genetics 193:803-17
Grogan, Dennis; Jinks-Robertson, Sue (2012) Formaldehyde-induced mutagenesis in Saccharomyces cerevisiae: molecular properties and the roles of repair and bypass systems. Mutat Res 731:92-8
Mudrak, Sarah V; Welz-Voegele, Caroline; Jinks-Robertson, Sue (2009) The polymerase eta translesion synthesis DNA polymerase acts independently of the mismatch repair system to limit mutagenesis caused by 7,8-dihydro-8-oxoguanine in yeast. Mol Cell Biol 29:5316-26
Abdulovic, Amy L; Minesinger, Brenda K; Jinks-Robertson, Sue (2008) The effect of sequence context on spontaneous Polzeta-dependent mutagenesis in Saccharomyces cerevisiae. Nucleic Acids Res 36:2082-93
Abdulovic, Amy L; Minesinger, Brenda K; Jinks-Robertson, Sue (2007) Identification of a strand-related bias in the PCNA-mediated bypass of spontaneous lesions by yeast Poleta. DNA Repair (Amst) 6:1307-18
Minesinger, Brenda K; Abdulovic, Amy L; Ou, Tingwei M et al. (2006) The effect of oxidative metabolism on spontaneous Pol zeta-dependent translesion synthesis in Saccharomyces cerevisiae. DNA Repair (Amst) 5:226-34
Abdulovic, Amy; Kim, Nayun; Jinks-Robertson, Sue (2006) Mutagenesis and the three R's in yeast. DNA Repair (Amst) 5:409-21
Abdulovic, Amy L; Jinks-Robertson, Sue (2006) The in vivo characterization of translesion synthesis across UV-induced lesions in Saccharomyces cerevisiae: insights into Pol zeta- and Pol eta-dependent frameshift mutagenesis. Genetics 172:1487-98
Sabbioneda, Simone; Minesinger, Brenda K; Giannattasio, Michele et al. (2005) The 9-1-1 checkpoint clamp physically interacts with polzeta and is partially required for spontaneous polzeta-dependent mutagenesis in Saccharomyces cerevisiae. J Biol Chem 280:38657-65

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