The ability of the eucaryotic cell to adapt to external stimuli and participate in integrated organismal function depends on the activity of protein kinases. In particular, the nonreceptor class of protein tyrosine kinases plays essential roles in transferring extracellular information across the plasma membrane to specific intracellular protein targets. This is a highly regulated process that involves phosphorylation, subcellular localization and domain-domain and protein-protein interactions. In this proposal, attention will be focused on understanding how Src family nonreceptor protein tyrosine kinases are regulated through Csk (the COOH terminal Src kinase). Csk phosphorylates the C-termini and down-regulates all members of the Src enzyme family. This places Csk at the top of many signaling cascades essential for biological function. The broad, long-term objectives of this investigation will be (a) to determine how Csk recognizes and phosphorylates protein substrates in the Src family, (b) to study the role of serine phosphorylation in regulating Csk function at both in vitro and in vivo levels, and (c) to establish how scaffolding/effector proteins influence domain-domain communication and catalytic function. To accomplish these goals, a wide range of research tools will be innovatively coupled including hydrogen-deuterium exchange, protease footprinting, mass spectrometry, in vivo kinase activity reporters, mass tagging, rapid quench flow mixing, and stopped-flow fluorescence spectroscopy. This project will provide essential information on a critical biomolecular interaction which influences all eucaryotic cells and is a viable therapeutic target. ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM068168-08
Application #
6747922
Study Section
Biophysical Chemistry Study Section (BBCB)
Program Officer
Flicker, Paula F
Project Start
1997-08-20
Project End
2007-05-31
Budget Start
2004-06-01
Budget End
2005-05-31
Support Year
8
Fiscal Year
2004
Total Cost
$265,079
Indirect Cost
Name
University of California San Diego
Department
Pharmacology
Type
Schools of Medicine
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Mills, Jamie E; Whitford, Paul C; Shaffer, Jennifer et al. (2007) A novel disulfide bond in the SH2 Domain of the C-terminal Src kinase controls catalytic activity. J Mol Biol 365:1460-8
Lieser, Scot A; Shaffer, Jennifer; Adams, Joseph A (2006) SRC tail phosphorylation is limited by structural changes in the regulatory tyrosine kinase Csk. J Biol Chem 281:38004-12
Lieser, Scot A; Aubol, Brandon E; Wong, Lilly et al. (2005) Coupling phosphoryl transfer and substrate interactions in protein kinases. Biochim Biophys Acta 1754:191-9
Wong, Lilly; Lieser, Scot A; Miyashita, Osamu et al. (2005) Coupled motions in the SH2 and kinase domains of Csk control Src phosphorylation. J Mol Biol 351:131-43
Lieser, Scot A; Shindler, Caitlin; Aubol, Brandon E et al. (2005) Phosphoryl transfer step in the C-terminal Src kinase controls Src recognition. J Biol Chem 280:7769-76
Wong, Lilly; Lieser, Scot; Chie-Leon, Barbara et al. (2004) Dynamic coupling between the SH2 domain and active site of the COOH terminal Src kinase, Csk. J Mol Biol 341:93-106
Wong, Lilly; Jennings, Patricia A; Adams, Joseph A (2004) Communication pathways between the nucleotide pocket and distal regulatory sites in protein kinases. Acc Chem Res 37:304-11
Aubol, Brandon E; Nolen, Brad; Shaffer, Jennifer et al. (2003) Novel destabilization of nucleotide binding by the gamma phosphate of ATP in the yeast SR protein kinase Sky1p. Biochemistry 42:12813-20
Aubol, Brandon E; Chakrabarti, Sutapa; Ngo, Jacky et al. (2003) Processive phosphorylation of alternative splicing factor/splicing factor 2. Proc Natl Acad Sci U S A 100:12601-6