This is a revised proposal for a renewal application for 1R01GM080372 Function and regulation of the ETS transcriptional repressor TEL1/Yan. Developmental programs are driven by transcription factors that coordinate precise patterns of gene expression in response to inductive signaling cues. The goals of this proposal are to uncover the regulatory strategies that keep gene expression programs in progenitors stably off, yet poised for rapid and precise activation in response to the inductive cues that initiate cell fate specification. Specifically we will study how the action of two members of the conserved ETS family of transcription factors, a repressor Yan and an activator Pointed (Pnt), known as TEL1/ETV6 and ETS1/ETS2 in humans, orchestrates the transition from progenitor to specified cell fate in response to receptor tyrosine kinase/Ras/MAPK signaling pathway. The central hypothesis is that the activator Pointed organizes and coordinates the entire sequence of events by first cooperating with Yan to establish the initial repressed state and then working in opposition to switch the system over to activation of gene expression and adoption of cell fate.
Aim 1 explores how different Pointed isoforms determine the system's sensitivity and response to MAPK signaling.
Aim 2 will elucidate the molecular mechanisms that coordinate Pointed's dual roles as repressor and activator during the cell fate specification process. Because the ideas we are testing address fundamental mechanisms of developmental regulation, and the signaling factors and transcriptional networks we study are conserved, the discoveries that emerge will have broad impact.

Public Health Relevance

The combination of unsurpassed genetic tractability and the extensive evolutionary conservation of developmental signaling networks makes Drosophila an ideal model system in which to elucidate the molecular mechanisms that ensure accurate and robust transitions from multipotent progenitor to specified cell fate. Our approach is to investigate how the coordinate action of two antagonistic transcription factors directs the changes in downstream gene expression programs needed to effect developmental transitions. Because these transcription factors have conserved functions in mammals, and because their dysregulation contributes to oncogenic transformation in a number of leukemias and solid tumors, the discoveries that emerge from our investigations will improve understanding of human development and disease.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM080372-10
Application #
9985115
Study Section
Development - 2 Study Section (DEV2)
Program Officer
Adkins, Ronald
Project Start
2007-07-01
Project End
2023-07-31
Budget Start
2020-08-01
Budget End
2021-07-31
Support Year
10
Fiscal Year
2020
Total Cost
Indirect Cost
Name
University of Chicago
Department
Internal Medicine/Medicine
Type
Schools of Medicine
DUNS #
005421136
City
Chicago
State
IL
Country
United States
Zip Code
60637
Hope, C Matthew; Webber, Jemma L; Tokamov, Sherzod A et al. (2018) Tuned polymerization of the transcription factor Yan limits off-DNA sequestration to confer context-specific repression. Elife 7:
Webber, Jemma L; Zhang, Jie; Massey, Alex et al. (2018) Collaborative repressive action of the antagonistic ETS transcription factors Pointed and Yan fine-tunes gene expression to confer robustness in Drosophila. Development 145:
Boisclair Lachance, Jean-François; Webber, Jemma L; Hong, Lu et al. (2018) Cooperative recruitment of Yan via a high-affinity ETS supersite organizes repression to confer specificity and robustness to cardiac cell fate specification. Genes Dev 32:389-401
Hope, C Matthew; Rebay, Ilaria; Reinitz, John (2017) DNA Occupancy of Polymerizing Transcription Factors: A Chemical Model of the ETS Family Factor Yan. Biophys J 112:180-192
Peláez, Nicolás; Gavalda-Miralles, Arnau; Wang, Bao et al. (2015) Dynamics and heterogeneity of a fate determinant during transition towards cell differentiation. Elife 4:
Boisclair Lachance, Jean-François; Peláez, Nicolás; Cassidy, Justin J et al. (2014) A comparative study of Pointed and Yan expression reveals new complexity to the transcriptional networks downstream of receptor tyrosine kinase signaling. Dev Biol 385:263-78
Webber, Jemma L; Rebay, Ilaria (2014) Long-range integration of repressive and patterning inputs. Cell Cycle 13:1653-4
Webber, Jemma L; Zhang, Jie; Mitchell-Dick, Aaron et al. (2013) 3D chromatin interactions organize Yan chromatin occupancy and repression at the even-skipped locus. Genes Dev 27:2293-8
Webber, Jemma L; Zhang, Jie; Cote, Lauren et al. (2013) The relationship between long-range chromatin occupancy and polymerization of the Drosophila ETS family transcriptional repressor Yan. Genetics 193:633-49
Zhang, Jie; Graham, Thomas G W; Vivekanand, Pavithra et al. (2010) Sterile alpha motif domain-mediated self-association plays an essential role in modulating the activity of the Drosophila ETS family transcriptional repressor Yan. Mol Cell Biol 30:1158-70

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