Carbohydrates are ubiquitous in nature and play an essential role in a variety of important biological processes. In contrast to the in-depth understanding of the molecular mechanisms of nucleic acid and protein biosynthesis, polysaccharide biosynthesis is poorly understood. In spite of the remarkable structural diversity of polysaccharides, only three major elongation/polymerization mechanisms, namely wzy- dependent, ABC-transporter dependent and synthase-dependent, are utilized based on previous extensive genetic studies. Among them, the wzy-dependent pathway is the most widely used in nature. It has been implicated in the biosynthesis of a variety of hetero-polysaccharides such as O-polysaccharides, capsular polysaccharides, exo- polysaccharides, colonic acids and enterobacterial common antigens. The current working model for the wzy-dependent pathway is that the individual repeating oligosaccharide unit is synthesized in the cytoplasm by the sequential action of specific glycosyltransferases. The repeating unit is then transported to the periplasmic side of the membrane where it is polymerized into a polysaccharide by the polymerase Wzy. The chain length of the polymer is regulated by the Wzz protein. So far, with the exception of gene knockout experiments, this rough biosynthetic picture has never been experimentally tested in vitro. Most of the critical enzymes in the hypothesized pathway have never been biochemically characterized and their mechanisms of action (especially for the O-polysaccharide polymerization, regulation and transport) are rather speculative. In the past three years, using E. coli O86 O-polysaccharide as a model system, we have made significant progress towards understanding polysaccharide biosynthesis. In this proposed research period, we plan to focus on the following three specific aims:
Aim 1. Chemo-enzymatic synthesis of O-unit-PP-lipid substrates/analogs. These chemically defined substrates will be used for probing Wzy polymerization reaction mechanism.
Aim 2. Investigation of polymerase Wzy. This section includes development of in vitro assays to obtain reliable kinetics and investigation of lipid specificity and chain elongation direction.
Aim 3. Investigation of Wzz and probing chain length regulation. This section includes the investigation of Wzy-Wzz interaction, Wzz-polysaccharide interaction and Wzz oligomeric states using a series of biochemical and biophysical approaches. In summary, this long-term research program will uncover the detailed biosynthetic mechanism of complex carbohydrate polymers. An in-depth understanding of biosynthesis of polysaccharides will have a considerable impact on research and development of novel antibiotics, vaccines, immuno-suppressors, and anti-inflammatory agents.
Many pathogenic bacteria species are surrounded by a capsular structure that is assembled from structurally diverse, high molecular weight polysaccharides. These cell surface polysaccharides play an essential role in mediating interactions between bacterial cells and their environment, and are recognized as an important pathogenic factor. Thus understanding how the polysaccharides are biosynthesized in the cell in molecular level is a fundamentally important biological question with significant medical implications. For example, it can provide new targets for the development of new antibiotics against emerging drug resistance problems;new methods to detect new pathogenic bacteria;new strategies to generate polysaccharide-based vaccines, immuno-suppressors and anti-inflammatory agents.
|Aguilar, Aime Lopez; Hou, Xiaomeng; Wen, Liuqing et al. (2017) A Chemoenzymatic Histology Method for O-GlcNAc Detection. Chembiochem 18:2416-2421|
|Wen, Liuqing; Zang, Lanlan; Huang, Kenneth et al. (2016) Efficient enzymatic synthesis of L-rhamnulose and L-fuculose. Bioorg Med Chem Lett 26:969-972|
|Wen, Liuqing; Zheng, Yuan; Li, Tiehai et al. (2016) Enzymatic synthesis of 3-deoxy-d-manno-octulosonic acid (KDO) and its application for LPS assembly. Bioorg Med Chem Lett 26:2825-2828|
|Liu, Yunpeng; Wen, Liuqing; Li, Lei et al. (2016) A General Chemoenzymatic Strategy for the Synthesis of Glycosphingolipids. European J Org Chem 2016:4315-4320|
|Wen, Liuqing; Huang, Kenneth; Zheng, Yuan et al. (2016) A two-step strategy for the preparation of 6-deoxy-l-sorbose. Bioorg Med Chem Lett 26:4358-61|
|Wen, Liuqing; Zheng, Yuan; Jiang, Kuan et al. (2016) Two-Step Chemoenzymatic Detection of N-Acetylneuraminic Acid-?(2-3)-Galactose Glycans. J Am Chem Soc 138:11473-6|
|Wen, Liuqing; Huang, Kenneth; Zheng, Yuan et al. (2016) Two-step enzymatic synthesis of 6-deoxy-L-psicose. Tetrahedron Lett 57:3819-3822|
|Wu, Zhigang; Zhao, Guohui; Li, Tiehai et al. (2016) Biochemical characterization of an ?1,2-colitosyltransferase from Escherichia coli O55:H7. Glycobiology 26:493-500|
|Li, Lei; Woodward, Robert L; Han, Weiqing et al. (2016) Chemoenzymatic synthesis of the bacterial polysaccharide repeating unit undecaprenyl pyrophosphate and its analogs. Nat Protoc 11:1280-98|
|Li, Shanshan; Zhu, He; Wang, Jiajia et al. (2016) Comparative analysis of Cu (I)-catalyzed alkyne-azide cycloaddition (CuAAC) and strain-promoted alkyne-azide cycloaddition (SPAAC) in O-GlcNAc proteomics. Electrophoresis 37:1431-6|
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