Telomeres protect human chromosomes from degradation, fusion, and other enzymatic attack. During the replicative cycle telomeres shorten and therefore erode as a function of cell division. This mechanism limits the number of times cells can divide, representing a powerful tumor-suppressive pathway. Cancer cells, in order to acquire immortality, have to circumvent replication-associated telomere shortening and do so by activating either one of two possible telomere maintenance mechanisms. Most cancer cells switch on the telomerase pathway, dependent on the upregulation of the catalytic subunit of telomerase, a reverse transcriptase that specifically elongates the TTAGGG repeats at chromosome ends. Consequently, telomerase activity is a hallmark of most cancer cells and telomerase is the subject of intense research and targeting approaches. A subgroup of cancer cells, frequently of mesenchymal origin, maintains their telomeres in the absence of telomerase activity. These cells manage to avoid telomere shortening by activating Alternative Lengthening of Telomeres pathways (ALT). ALT is an outcome of recombination between telomeres, leading to DNA synthesis and consequently to length gains, avoiding critically short telomeres. While it is known that recombination is required for ALT, it is entirely unclear how ALT is activated, how ALT is maintained and why some tumor types prefer to activate ALT instead of telomerase. Furthermore, evidence is emerging that ALT can be activated as a resistance mechanism to telomerase inhibition, pointing out that both telomerase and ALT have to be understood and inhibited, before the targeting of telomere length mechanisms can become an effective and widely used cancer therapy. Previously no experimental models existed where ALT can be induced in a controlled environment. Progress during the last grant period has provided such models in nematodes as well as in mammalian cells. In the three specific aims of this renewal application, it is proposed to take advantage of these models to further our understanding of ALT activation and regulation. First, the molecular steps of ALT activation in C. elegans will be deciphered and changes in the telomeric complex upon ALT induction will be investigated. Second, the focus will be on RTEL1, a regulator of ALT that emerged from research during the past grant period, as a central factor in ALT maintenance. Third, the hypothesis will be investigated that replication fork stalling leads to a chromatin environment that favors ALT activation. In summary, this proposal is designed to take advantage of models for ALT activation in mammals and nematodes to understand this essential pathway.

Public Health Relevance

Cancer is an extremely heterogeneous disease, and the multiple tumor types share only few common aspects that can be targeted for therapy. Telomere maintenance either by telomerase activation or ALTernative pathways is one of those, since all cancers need to find ways to maintain their chromosome ends. Here we propose to investigate in three specific aims how ALT is regulated, employing the genetically tractable C. elegans system as well as mammalian approaches, with the goal of developing diagnostic markers and inhibitors for cancer therapy.

National Institute of Health (NIH)
National Institute of General Medical Sciences (NIGMS)
Research Project (R01)
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Special Emphasis Panel (ZRG1)
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Carter, Anthony D
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Salk Institute for Biological Studies
La Jolla
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Li, Julia Su Zhou; Miralles Fusté, Javier; Simavorian, Tatevik et al. (2017) TZAP: A telomere-associated protein involved in telomere length control. Science 355:638-641
Rivera, Teresa; Haggblom, Candy; Cosconati, Sandro et al. (2017) A balance between elongation and trimming regulates telomere stability in stem cells. Nat Struct Mol Biol 24:30-39
Arnoult, Nausica; Correia, Adriana; Ma, Jiao et al. (2017) Regulation of DNA repair pathway choice in S and G2 phases by the NHEJ inhibitor CYREN. Nature 549:548-552
Arnoult, Nausica; Karlseder, Jan (2015) Complex interactions between the DNA-damage response and mammalian telomeres. Nat Struct Mol Biol 22:859-66
Hayashi, Makoto T; Cesare, Anthony J; Rivera, Teresa et al. (2015) Cell death during crisis is mediated by mitotic telomere deprotection. Nature 522:492-6
Lackner, Daniel H; Hayashi, Makoto T; Cesare, Anthony J et al. (2014) A genomics approach identifies senescence-specific gene expression regulation. Aging Cell 13:946-50
Karlseder, Jan (2014) Modern genome editing meets telomeres: the many functions of TPP1. Genes Dev 28:1857-8
Arnoult, Nausica; Karlseder, Jan (2014) ALT telomeres borrow from meiosis to get moving. Cell 159:11-12
O'Sullivan, Roderick J; Arnoult, Nausica; Lackner, Daniel H et al. (2014) Rapid induction of alternative lengthening of telomeres by depletion of the histone chaperone ASF1. Nat Struct Mol Biol 21:167-74
Oganesian, Liana; Karlseder, Jan (2013) 5' C-rich telomeric overhangs are an outcome of rapid telomere truncation events. DNA Repair (Amst) 12:238-45

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