The inducible transcriptional factor NF-?B is a critical mediator of intracellular signaling. It has been linked with cellular response to pro-inflammatory signals and control of the expression of a vast array of genes involved in immune and stress responses, cancer, and apoptosis. While the process of NF-?B activation in the cytoplasm is well understood, little is known regarding the mechanism of NF-?B activation inside the cell nucleus and how NF-?B selectively targets specific genes. We propose to study the mechanisms by which NF-?B is regulated in the cell nucleus in response to oxidative stress. In our recent study, we demonstrated that a human metalloprotein pirin is a nuclear regulator of NF-?B. The long-term objective is to elucidate the regulatory mechanisms by which pirin participates in nuclear regulation of NF-?B. Pirin is a non-heme iron protein expressed in human tissues. We have found that the pirin metal center plays an important role in complex formation between pirin and NF-?B. The ferric, but not ferrous, form of pirin substantially facilities bindin of NF-?B proteins to target ?B genes, which suggests that pirin performs a redox sensing role in NF- ?B regulation. We hypothesize that pirin is a nuclear redox sensor protein, the last fortress protecting cells from substantial redox shifting through NF-?B-linked immune defense. Understanding regulation of the inducible transcriptional factor by pirin is thus fundamentally important. We will determine the structural components that control association and dissociation of pirin protein to the NF-?B proteins. We will identify the target signaling genes triggered by human pirin, finally we will perform cellular and in vivo studies to further test the functional relationship between pirin and NF-?B homodimer and heterodimer proteins and how this relationship changes in response to oxidative stress.

Public Health Relevance

The aim of this study is to elucidate the mechanism by which the primary immune signaling system mediated by transcription factor NF-?B proteins acts on specific genes in the cell nucleus. This will be accomplished through determination of the relevant function of the human iron-binding protein pirin with NF- ?B and the identification of the target genes for the specific stimuli. A ground-breaking new redox sensing mechanism and NF-?B transcription regulation in the cell nucleus is proposed and will be further studied. The abilit to determine the molecular mechanism of redox signaling regulation by protein-bound iron will lead to new protective strategies against oxidative stress, and the outcome of this work will identify novel targets for pharmaceutical intervention.

National Institute of Health (NIH)
National Institute of General Medical Sciences (NIGMS)
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Macromolecular Structure and Function A Study Section (MSFA)
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Barski, Oleg
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Georgia State University
Schools of Arts and Sciences
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Li, Jiasong; Griffith, Wendell P; Davis, Ian et al. (2018) Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase. Nat Chem Biol 14:853-860
Davis, Ian; Yang, Yu; Wherritt, Daniel et al. (2018) Reassignment of the human aldehyde dehydrogenase ALDH8A1 (ALDH12) to the kynurenine pathway in tryptophan catabolism. J Biol Chem 293:9594-9603
Wang, Yifan; Griffith, Wendell P; Li, Jiasong et al. (2018) Cofactor Biogenesis in Cysteamine Dioxygenase: C-F Bond Cleavage with Genetically Incorporated Unnatural Tyrosine. Angew Chem Int Ed Engl 57:8149-8153
Yang, Yu; Liu, Fange; Liu, Aimin (2018) Adapting to oxygen: 3-Hydroxyanthrinilate 3,4-dioxygenase employs loop dynamics to accommodate two substrates with disparate polarities. J Biol Chem 293:10415-10424
Krishnan, V Mahesh; Davis, Ian; Baker, Tessa M et al. (2018) Backbone Dehydrogenation in Pyrrole-Based Pincer Ligands. Inorg Chem 57:9544-9553
Harusato, A; Abo, H; Ngo, V L et al. (2017) IL-36? signaling controls the induced regulatory T cell-Th9 cell balance via NF?B activation and STAT transcription factors. Mucosal Immunol 10:1455-1467
Lin, Jizhen; Hafrén, Lena; Kerschner, Joseph et al. (2017) Panel 3: Genetics and Precision Medicine of Otitis Media. Otolaryngol Head Neck Surg 156:S41-S50
Fielding, Andrew J; Dornevil, Kednerlin; Ma, Li et al. (2017) Probing Ligand Exchange in the P450 Enzyme CYP121 from Mycobacterium tuberculosis: Dynamic Equilibrium of the Distal Heme Ligand as a Function of pH and Temperature. J Am Chem Soc 139:17484-17499
Raji, Idris; Yadudu, Fatima; Janeira, Emily et al. (2017) Bifunctional conjugates with potent inhibitory activity towards cyclooxygenase and histone deacetylase. Bioorg Med Chem 25:1202-1218
Dornevil, Kednerlin; Davis, Ian; Fielding, Andrew J et al. (2017) Cross-linking of dicyclotyrosine by the cytochrome P450 enzyme CYP121 from Mycobacterium tuberculosis proceeds through a catalytic shunt pathway. J Biol Chem 292:13645-13657

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