During metazoan development, polarization of the body axes is of critical importance, as asymmetric cell division initiates cell specialization pathways. A family of conserved RNA-binding proteins characterized by CCCH-type tandem zinc finger (TZF) domains is required for axis polarization and cell type specification in the early embryo of C. elegans. A cascade of events essential to the oocyte- to-embryo transition is driven by three members of this family. The process initiates with OMA-1/2 turnover and culminates with asymmetric segregation of POS-1 and MEX-5/6 to opposing poles of the embryo. Mutation of OMA-1/2 blocks oocyte maturation and prevents fertilization. Mutation of MEX-5/6 or POS-1 leads to embryonic death with abnormal cell fate specification. Although these TZF domains are characterized by high sequence homology, they have evolved to have different propensities toward intrinsic disorder and recognize diverse RNA sequences. Our goal is to define the molecular basis of RNA recognition and binding specificity using NMR spectroscopy, computer simulations, and quantitative biochemistry. We will probe how different structural plasticity and RNA-binding activity contribute to each protein's biological activity in worms. This research will lead to a new understanding of the factors that determine RNA affinity and specificity and their role in embryogenesis.

Public Health Relevance

Post-transcriptional regulation of maternal mRNAs is responsible for many of the developmental events that occur in the early stages of embryogenesis. By understanding the mechanisms that regulate mRNAs during embryogenesis our research will identify how this control is tied to the development of living cells and will ultimately provide insights into the molecular basis of congenital developmental diseases.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM117008-03
Application #
9534130
Study Section
Macromolecular Structure and Function B Study Section (MSFB)
Program Officer
Willis, Kristine Amalee
Project Start
2016-09-15
Project End
2020-07-31
Budget Start
2018-08-01
Budget End
2019-07-31
Support Year
3
Fiscal Year
2018
Total Cost
Indirect Cost
Name
University of Massachusetts Medical School Worcester
Department
Biochemistry
Type
Schools of Medicine
DUNS #
603847393
City
Worcester
State
MA
Country
United States
Zip Code
Tavella, Davide; Zitzewitz, Jill A; Massi, Francesca (2018) Characterization of TDP-43 RRM2 Partially Folded States and Their Significance to ALS Pathogenesis. Biophys J 115:1673-1680
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Dowdle, Megan E; Imboden, Susanne Blaser; Park, Sookhee et al. (2017) Horizontal Gel Electrophoresis for Enhanced Detection of Protein-RNA Complexes. J Vis Exp :