Specific rearrangements of human chromosome 3 have been characteristically associated with malignant and developmental disorders. Deletion of the chromosome 3p14-21 region is the constant cytogenetic feature in spontaneous carcinoma of the kidney and the same region is involved in hereditary renal carcinoma due to a 3;8 translocation. This region is also part of a larger deletion (3p14-23) characteristically associated with small cell carcinoma of the lung, the seventh most common form of cancer in the United States and a disease which is doubling in incidence every decade. Chromosome 3p14.2 is also the location of the most common constitutive fragile site which may be involved in the pathogenesis of some of these rearrangements. We propose to characterize the chromosome 3p14-21 region, especially the 3p14.2-3p21.1 area which is bounded by two biologically important translocations, and which is common to the renal and small cell carcinoma deletions. These are the hereditary renal cell translocation, t(3;8)(p14.2;q24.1) and the familial Grieg Polysyndactyly craniofacial anomalies 3;7 translocation, t(3;7)(p21.1;p13). We will construct a physical linkage map of this region using a combination of somatic cell hybrids which define and span this region, DNA sequences from a flow sorted chromosome 3 library, and pulsed-field electrophoresis. We propose to define at the molecular level a region which is consistently altered in renal and small cell lung cancer, and to isolate the breakpoint in the hereditary renal carcinoma 3;8 translocation. These studies should facilitate the isolation of a critical gene(s) involved in the pathogenesis of these diseases, and should also contribute to the mapping and sequencing of the human genome

Agency
National Institute of Health (NIH)
Institute
Eunice Kennedy Shriver National Institute of Child Health & Human Development (NICHD)
Type
Research Project (R01)
Project #
5R01HD023826-02
Application #
3324136
Study Section
Mammalian Genetics Study Section (MGN)
Project Start
1988-03-01
Project End
1991-02-28
Budget Start
1989-03-01
Budget End
1990-02-28
Support Year
2
Fiscal Year
1989
Total Cost
Indirect Cost
Name
University of Colorado Denver
Department
Type
Schools of Medicine
DUNS #
065391526
City
Aurora
State
CO
Country
United States
Zip Code
80045
Smith, S E; Joseph, A; Nadeau, S et al. (1993) Cloning and characterization of the human t(3;6)(p14;p11) translocation breakpoint associated with hematologic malignancies. Cancer Genet Cytogenet 71:15-21
Boldog, F L; Gemmill, R M; Wilke, C M et al. (1993) Positional cloning of the hereditary renal carcinoma 3;8 chromosome translocation breakpoint. Proc Natl Acad Sci U S A 90:8509-13
Drabkin, H A; Mendez, M J; Rabbitts, P H et al. (1992) Characterization of the submicroscopic deletion in the small-cell lung carcinoma (SCLC) cell line U2020. Genes Chromosomes Cancer 5:67-74
Miller, Y E; Drabkin, H; Jones, C et al. (1990) Human aminoacylase-1: cloning, regional assignment to distal chromosome 3p21.1, and identification of a cross-hybridizing sequence on chromosome 18. Genomics 8:149-54
Drabkin, H; Wright, M; Jonsen, M et al. (1990) Development of a somatic cell hybrid mapping panel and molecular probes for human chromosome 3. Genomics 8:435-46
Gemmill, R M; Coyle-Morris, J; Ware-Uribe, L et al. (1989) A 1.5-megabase restriction map surrounding MYC does not include the translocation breakpoint in familial renal cell carcinoma. Genomics 4:28-35
Drabkin, H; Sage, M; Helms, C et al. (1989) Regional and physical mapping studies characterizing the Greig polysyndactyly 3;7 chromosome translocation, t(3;7)(p21.1;p13). Genomics 4:518-29
Drabkin, H; Kao, F T; Hartz, J et al. (1988) Localization of human ERBA2 to the 3p22----3p24.1 region of chromosome 3 and variable deletion in small cell lung cancer. Proc Natl Acad Sci U S A 85:9258-62