There are two main goals of this project. In the first, we hope to gain a better understanding of a novel mechansim of RNA depednent transcriptional regulation. In the second, we hope to gain a better understanding of how GABAergic neuronal differentiation and migration are comtrolled. The first goal focuses on how the novel non-coding RNAs, embryonic ventral forebrain (Evf), influence transcription of the Dlx 5/6 enhancer. Evf ncRNAs are the first developmentally regulated ncRNAs to be discovered that affect the transcriptional activity of a homeodomain protein. Evf ncRNAs are also the first ncRNAs shown to cooperate and complex with a homeobox-containing transcription factor. The proposed studies would therefore be the first to investigate the in vivo role of developmentally regulated ncRNA-dependent modulation of enhancer activity. The importance of mechanistic studies of RNA function is clear from the number of regulatory RNAs thought to be involved different diseases. These include: Prader Willi Syndrome, diGeorge Syndrome, Beckwith-Wiedeman syndrome, Spinocerebellar ataxia type 8, and campomelic dysplasia.

Public Health Relevance

This grant proposes to investigate a new mechanism of gene regulation that is critical for GABAergic interneuron development. Since altered GABAergic interneuron function has been linked to epilepsy, autism, schizophrenia, and mental retardation, studies on the normal development of GABAergic interneurons are critical to understanding the molecular bases for these diseases. Ultimately, it is hoped that a better understanding of the development of specific neuronal subpopulations in the brain will lead to the prevention and treatment of human neurological diseases.

Agency
National Institute of Health (NIH)
Institute
Eunice Kennedy Shriver National Institute of Child Health & Human Development (NICHD)
Type
Research Project (R01)
Project #
5R01HD056504-02
Application #
7894925
Study Section
Neurogenesis and Cell Fate Study Section (NCF)
Program Officer
Henken, Deborah B
Project Start
2009-08-01
Project End
2011-07-31
Budget Start
2010-08-01
Budget End
2011-07-31
Support Year
2
Fiscal Year
2010
Total Cost
$438,060
Indirect Cost
Name
Children's Memorial Hospital (Chicago)
Department
Type
DUNS #
074438755
City
Chicago
State
IL
Country
United States
Zip Code
60611
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Cajigas, Ivelisse; Leib, David E; Cochrane, Jesse et al. (2015) Evf2 lncRNA/BRG1/DLX1 interactions reveal RNA-dependent inhibition of chromatin remodeling. Development 142:2641-52
Berghoff, Emily G; Clark, Mary F; Chen, Sean et al. (2013) Evf2 (Dlx6as) lncRNA regulates ultraconserved enhancer methylation and the differential transcriptional control of adjacent genes. Development 140:4407-16
Kohtz, Jhumku D; Berghoff, Emily G (2010) Regulatory long non-coding RNAs and neuronal disorders. Physiol Behav 100:250-4
Himmelstein, Diana S; Bi, Chunming; Clark, Brian S et al. (2010) Balanced Shh signaling is required for proper formation and maintenance of dorsal telencephalic midline structures. BMC Dev Biol 10:118