Funding Agency

Agency
National Institute of Health (NIH)
Institute
National Human Genome Research Institute (NHGRI)
Type
Research Project (R01)
Project #
9R01HG002235-06
Application #
6011731
Study Section
Biomedical Library and Informatics Review Committee (BLR)
Program Officer
Felsenfeld, Adam
Project Start
1994-09-01
Project End
2002-11-30
Budget Start
1999-12-07
Budget End
2000-11-30
Support Year
6
Fiscal Year
2000
Total Cost
$273,285
Indirect Cost

  Institution

Name
Stanford University
Department
Biochemistry
Type
Schools of Medicine
DUNS #
800771545
City
Stanford
State
CA
Country
United States
Zip Code
94305

  Publications

Su, Qiaojuan Jane; Lu, Lin; Saxonov, Serge et al. (2005) eBLOCKs: enumerating conserved protein blocks to achieve maximal sensitivity and specificity. Nucleic Acids Res 33:D178-82
Bennett, Steven P; Lu, Lin; Brutlag, Douglas L (2003) 3MATRIX and 3MOTIF: a protein structure visualization system for conserved sequence motifs. Nucleic Acids Res 31:3328-32
Liang, M P; Brutlag, D L; Altman, R B (2003) Automated construction of structural motifs for predicting functional sites on protein structures. Pac Symp Biocomput :204-15
Ben-Hur, Asa; Brutlag, Douglas (2003) Remote homology detection: a motif based approach. Bioinformatics 19 Suppl 1:i26-33
Liang, Mike P; Banatao, D Rey; Klein, Teri E et al. (2003) WebFEATURE: An interactive web tool for identifying and visualizing functional sites on macromolecular structures. Nucleic Acids Res 31:3324-7
Apaydin, Mehmet Serkan; Brutlag, Douglas L; Guestrin, Carlos et al. (2003) Stochastic roadmap simulation: an efficient representation and algorithm for analyzing molecular motion. J Comput Biol 10:257-81
Liu, X Shirley; Brutlag, Douglas L; Liu, Jun S (2002) An algorithm for finding protein-DNA binding sites with applications to chromatin-immunoprecipitation microarray experiments. Nat Biotechnol 20:835-9
Huang, J Y; Brutlag, D L (2001) The EMOTIF database. Nucleic Acids Res 29:202-4