The overall goals of this project are (a) the identification and characterization of those intermolecular contact sites that are energetically important in the deoxy sickle hemoglobin (HbS) aggregation process through direct detection of Hb motions and motional restrictions within the polymer state, (b) the use of non-covalent HbS gelation inhibitors as stereochemical probes for energetically important HbS polymerization sites through a determination of binding sites and stereochemistry, under solution conditions, for such inhibitors, with particular emphasis on a nitroxide spin labeled analog of phenylalanine (SL-Phe) that we have developed, (c) to further characterize the molecular stereochemistry of the nucleation process that appears to initiate HbS aggregation, and (d) to refine the application of saturation transfer EPR and pulsed EPR methods to provide more quantitative descriptions of slow macromolecular motions, both for deoxy HbS, and for general applications. Conventional, saturation transfer, and pulsed EPR (electron spin echo and pulse ELDOR) with 15N,2H-substituted spin labels, and multinuclear NMR spectroscopies will be used. The long range goals are to suggest routes for developing improved therapeutic procedures in sickle cell anemia through a more detailed molecular characterization of sickle hemoglobin aggregation mechanisms, and to develop improved spin label EPR methods for studying macromolecular motions by refining saturation transfer EPR methodology through a variety of methods to enhance resolution and interpretation, and by developing the use of pulsed EPR methods in relatively well-defined biomolecular systems.

Agency
National Institute of Health (NIH)
Institute
National Heart, Lung, and Blood Institute (NHLBI)
Type
Research Project (R01)
Project #
5R01HL023697-09
Application #
3337370
Study Section
Biophysics and Biophysical Chemistry A Study Section (BBCA)
Project Start
1979-09-01
Project End
1990-06-30
Budget Start
1988-07-01
Budget End
1989-06-30
Support Year
9
Fiscal Year
1988
Total Cost
Indirect Cost
Name
University of Illinois at Chicago
Department
Type
Schools of Pharmacy
DUNS #
121911077
City
Chicago
State
IL
Country
United States
Zip Code
60612
Prabhakaran, M; Johnson, M E (1993) Molecular dynamics of sickle and normal hemoglobins. Biopolymers 33:735-42
Manavalan, P; Prabhakaran, M; Johnson, M E (1992) Location of potential binding sites on deoxy hemoglobin for the design of antigelling agents. J Mol Biol 223:791-800
Xu, Y; Prabhakaran, M; Johnson, M E et al. (1990) Secondary structure prediction for the spectrin 106-amino acid segment, and a proposed model for tertiary structure. J Biomol Struct Dyn 8:55-62
De Croos, P Z; Sangdee, P; Stockwell, B L et al. (1990) Hemoglobin S antigelation agents based on 5-bromotryptophan with potential for sickle cell anemia. J Med Chem 33:3138-42
Yuan, C J; Hopfinger, A J; Johnson, M E (1989) QSAR and molecular shape analysis of aryl-substituted alanine analogs as antigelling agents. J Theor Biol 141:41-52
Fung, L W; Lu, H Z; Hjelm Jr, R P et al. (1989) Quantitative detection of rapid motions in spectrin by NMR. Life Sci 44:735-40
Thiyagarajan, P; Johnson, M E (1987) Saturation-transfer electron paramagnetic resonance detection of anisotropic motion by sickle hemoglobin molecules in the polymer state. Biochemistry 26:1903-9
Hjelm Jr, R P; Thiyagarajan, P; Johnson, M E (1986) CD of gels and suspensions: apparent CD in the soret region of sickle hemoglobin gels. Biopolymers 25:1359-78
Fung, L W; Lu, H Z; Hjelm Jr, R P et al. (1986) Selective detection of rapid motions in spectrin by NMR. FEBS Lett 197:234-8
Lee, Y H; Currie, B L; Johnson, M E (1986) Interaction of a spin-labeled phenylalanine analogue with normal and sickle hemoglobins: detection of site-specific interactions through spin-label-induced 1H NMR relaxation. Biochemistry 25:5647-54