The posttranslational modification of endogenous proteins by the addition of a variety of amino acids occurs in axons of both vertebrate and invertebrate nerves. The activity of these reactions increases up to 100 fold following injury of the nerve. We are investigating these reactions with the long term goal of better understanding the biochemical events which occur in damaged axons, and identifying why certain nerves fail to regenerate following injury. The specific goals of the proposed experiments are to: 1) use biochemical procedures to determine if transfer RNA is the amino acid donor to the acceptor proteins. 2) Determine the site of addition (terminal, side chain) of the amino acid to the acceptor protein, using specific hydrolyzing enzymes, and HPLC and amino acid sequencing techniques. 3) To identify the targeted proteins by one and two dimensional gel electrophoresis in intact and regenerating rat sciatic and goldfish optic nerves. In these experiments, attempts will be made to identify modified proteins associated with slow component b in both nerves and synaptic terminals of goldfish optic nerves. 4) Examine protein modification of a wider range of proteins, in squid axoplasm. Axoplasm obtained from the giant axon of the squid can be analyzed free of contamination from supporting cells, and therefore is an excellent source for monitoring axon specific protein modification. 5) Demonstrate the reaction in vivo by use of injections of 3H amino acids directly in the rat sciatic nerve, followed by light (and possibly EM) autoradiography, and polyacrylamide gel electrophoresis. Further study of this reaction will yield important information concerning a novel biochemical reaction which occurs in nerve axons. Since this reaction is increased so dramatically following injury, it should also contribute to our understanding of the role these reactions play in nerve regeneration.

Agency
National Institute of Health (NIH)
Institute
National Institute of Neurological Disorders and Stroke (NINDS)
Type
Research Project (R01)
Project #
5R01NS019148-05
Application #
3399141
Study Section
Neurology B Subcommittee 1 (NEUB)
Project Start
1983-01-01
Project End
1989-08-31
Budget Start
1987-09-01
Budget End
1988-08-31
Support Year
5
Fiscal Year
1987
Total Cost
Indirect Cost
Name
University of Medicine & Dentistry of NJ
Department
Type
Schools of Medicine
DUNS #
605799469
City
Newark
State
NJ
Country
United States
Zip Code
07107
Yu, M; Chakraborty, G; Grabow, M et al. (1994) Serine protease inhibitors block N-terminal arginylation of proteins by inhibiting the arginylation of tRNA in rat brains. Neurochem Res 19:105-10
Yu, M; Grabow, M; Ingoglia, N A (1993) Isolation of a peptide that inhibits the posttranslational arginylation of proteins in rat brain. J Mol Neurosci 4:195-203
Chakraborty, G; Nicola, A; Ingoglia, N A (1992) Evidence that axonal tRNAs are resistant to RNase and ATPase and can be aminoacylated in the absence of exogenous ATP. J Neurochem 59:273-81
Ingoglia, N A; Chakroborty, G; Yu, M et al. (1991) Proteins isolated from regenerating sciatic nerves of rats form aggregates following posttranslational amino acid modification. J Mol Neurosci 2:185-92
Chakraborty, G; Sturman, J A; Ingoglia, N A (1990) Regulation of the post-translational conjugation of amino acids to rat brain proteins. Neuroscience 37:215-21
Chakraborty, G; Yu, M; Luo, D et al. (1990) Amino acid modification of proteins in regenerating sciatic nerves of rats. J Neurosci Res 25:503-10
Dayal, V K; Chakraborty, G; Sturman, J A et al. (1990) The site of amino acid addition to posttranslationally modified proteins of regenerating rat sciatic nerves. Biochim Biophys Acta 1038:172-7
Shyne-Athwal, S; Chakraborty, G; Gage, E et al. (1988) Comparison of posttranslational protein modification by amino acid addition after crush injury to sciatic and optic nerves of rats. Exp Neurol 99:281-95
Chakraborty, G; Leach, T; Zanakis, M F et al. (1987) Posttranslational protein modification by polyamines in intact and regenerating nerves. J Neurochem 48:669-75
Shyne-Athwal, S; Riccio, R V; Chakraborty, G et al. (1986) Protein modification by amino acid addition is increased in crushed sciatic but not optic nerves. Science 231:603-5

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