The overall aim of the project is to complete the final stage of development of a paradigm for assessing the nature and intensity of empirical drug combined-action called the universal response surface approach (URSA). The following subprojects will be completed: (i) the validity and utility of a set of theoretical/empirical mathematical/statistical models, which were derived to describe concentration-effect (dose-response) phenomena and agent interaction, will be investigated in laboratory studies of anticancer agents and combinations of agents with three assays: a total growth assay (TGA), a colony count assay (CCA), and an individual colony formation assay (iCFA). The laboratory emphasis will be on the two clonogenic assays. Much of the work completed during the previous funding period with the TGA will be replicated in a more limited manner with the clonogenic assays. With the TGA, the applicant will emphasize the conduct of combined-action experiments with three or more agents. (ii) Based upon the results of subproject #1, older models will be modified when appropriate, and newer models will be created and tested when needed. Improvements will also be made to design and model-fitting techniques. (iii) The mechanistic basis of the super synergy found between dihydrofolate reductase inhibitors and polyglutamylatable antifolates will be explored with several intracellular assays, including assays of folate and antifolate polyglutamate distributions. (iv) The software package, SYNFIT, developed under RR10742, will be revised and distributed. Comments will be solicited from users, and appropriate additional improvements and enhancements made. A special effort will be made to enhance user aids, such as the tutorial, manual, and HELP functions. This will facilitate the proper use of the statistical approach.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Research Project (R01)
Project #
5R01RR010742-07
Application #
2685819
Study Section
Experimental Therapeutics Subcommittee 1 (ET)
Project Start
1989-04-01
Project End
2000-03-31
Budget Start
1998-04-01
Budget End
1999-03-31
Support Year
7
Fiscal Year
1998
Total Cost
Indirect Cost
Name
Roswell Park Cancer Institute Corp
Department
Type
DUNS #
City
Buffalo
State
NY
Country
United States
Zip Code
14263
Brun, Yseult Francoise; Greco, William R (2010) Characterization of a three-drug nonlinear mixture response model. Front Biosci (Schol Ed) 2:454-67
Khinkis, Leonid A; Krzyzanski, Wojciech; Jusko, William J et al. (2009) D-optimal designs for parameter estimation for indirect pharmacodynamic response models. J Pharmacokinet Pharmacodyn 36:523-39
Brun, Yseult F; Varma, Ram; Hector, Suzanne M et al. (2008) Simultaneous modeling of concentration-effect and time-course patterns in gene expression data from microarrays. Cancer Genomics Proteomics 5:43-53
Varma, Ram; Hector, Suzanne; Greco, William R et al. (2007) Platinum drug effects on the expression of genes in the polyamine pathway: time-course and concentration-effect analysis based on Affymetrix gene expression profiling of A2780 ovarian carcinoma cells. Cancer Chemother Pharmacol 59:711-23
Brun, Yseult F; Dennis, Carly G; Greco, William R et al. (2007) Modeling the combination of amphotericin B, micafungin, and nikkomycin Z against Aspergillus fumigatus in vitro using a novel response surface paradigm. Antimicrob Agents Chemother 51:1804-12
Kau, Yi-Chuan; Hung, Yu-Chun; Zizza, Anthony M et al. (2006) Efficacy of lidocaine or bupivacaine combined with ephedrine in rat sciatic nerve block. Reg Anesth Pain Med 31:14-8
Varma, Rama R; Hector, Suzanne M; Clark, Kimberly et al. (2005) Gene expression profiling of a clonal isolate of oxaliplatin-resistant ovarian carcinoma cell line A2780/C10. Oncol Rep 14:925-32
Faessel, Helene M; Slocum, Harry K; Rustum, Youcef M et al. (2003) Thymidine and hypoxanthine protection patterns of the folic acid-enhanced synergies for combinations of trimetrexate plus a polyglutamylatable inhibitor of purine or thymidylate synthesis against human ileocecal HCT-8 cells. Int J Oncol 23:401-9
White, Donald B; Slocum, Harry K; Brun, Yseult et al. (2003) A new nonlinear mixture response surface paradigm for the study of synergism: a three drug example. Curr Drug Metab 4:399-409
Slocum, H K; Parsons, J C; Winslow, E O et al. (2000) Time-lapse video reveals immediate heterogeneity and heritable damage among human ileocecal carcinoma HCT-8 cells treated with raltitrexed (ZD1694). Cytometry 41:252-60

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