The overall objective of this project is to dramatically improve the capability of fetal MRI for diagnosis, analysis, and prognosis of craniofacial developmental disorders. These disorders present in three quarters of all human birth defects and affect approximately one in every 500 live births. Craniofacial disorders may cause serious long-term problems that affect the quality of life and result in higher disease risk. Improved knowledge of early craniofacial development and developmental disorders helps for better prognosis and treatment, better management of pregnancy, improved neonatal care, and better long-term outcomes. Non-invasive medical imaging techniques are the main tools to acquire information about the fetus in-utero. Prenatal sonography is routinely performed in the second trimester of pregnancy, and is considered to be the primary diagnostic tool. Nevertheless the diagnostic accuracy of sonography for complex craniofacial diseases such as cleft lip and cleft palate, hemifacial microsomia, micrognathia, etc. is extremely low. On the other hand magnetic resonance imaging (MRI) has become an excellent complement to sonography for accurate diagnosis and analysis of such complex diseases. Nonetheless, fetal MRI is limited to two-dimensional acquisitions by small signal available from the small fetal organs, and by intermittent fetal motion that disrupts spatial encoding necessary for accurate three-dimensional analysis. Novel image processing technology has recently been developed for the reconstruction of high-resolution three-dimensional MRI of the fetal brain. This technology has led to significant improvements in fetal neuroimaging. However, this technology cannot be directly or simply adapted to fetal MRI of craniofacial structures;the non-rigid and local movement of soft tissue, fluid, and craniomaxillofacial bones and semi-bony structures pose significant challenges in volume reconstruction.
The specific aim of this proposal is the development of novel models of soft tissue, fluid, and bone in craniofacial structures and local motion estimation based on these models. This will also be considered through the use of advanced image regularization techniques without explicit sub-voxel motion estimation.
The specific aims i n this proposal also involve the reconstruction of high-resolution fetal craniofacial MRI and their classification based on various types of disorders. The collected data will be shared with radiologists at Children's Hospital Boston as well as with the greater community of craniofacial experts on FaceBase consortium.

Public Health Relevance

Three dimensional high spatial resolution fetal MRI of craniofacial structures will be developed in this project to significantly improve the capability of fetal MRI for diagnosis, analysis, prognosis, and treatment of fetal craniofacial disorders.

Agency
National Institute of Health (NIH)
Institute
National Institute of Dental & Craniofacial Research (NIDCR)
Type
Small Research Grants (R03)
Project #
1R03DE022109-01
Application #
8176831
Study Section
Special Emphasis Panel (ZDE1-MH (18))
Program Officer
Fischer, Dena
Project Start
2011-07-01
Project End
2013-06-30
Budget Start
2011-07-01
Budget End
2012-06-30
Support Year
1
Fiscal Year
2011
Total Cost
$130,125
Indirect Cost
Name
Children's Hospital Boston
Department
Type
DUNS #
076593722
City
Boston
State
MA
Country
United States
Zip Code
02115
Tourbier, Sébastien; Velasco-Annis, Clemente; Taimouri, Vahid et al. (2017) Automated template-based brain localization and extraction for fetal brain MRI reconstruction. Neuroimage 155:460-472
Jia, Yuanyuan; He, Zhongshi; Gholipour, Ali et al. (2016) Single Anisotropic 3-D MR Image Upsampling via Overcomplete Dictionary Trained From In-Plane High Resolution Slices. IEEE J Biomed Health Inform 20:1552-1561
Gholipour, Ali; Afacan, Onur; Aganj, Iman et al. (2015) Super-resolution reconstruction in frequency, image, and wavelet domains to reduce through-plane partial voluming in MRI. Med Phys 42:6919-32
Velasco-Annis, Clemente; Gholipour, Ali; Afacan, Onur et al. (2015) Normative biometrics for fetal ocular growth using volumetric MRI reconstruction. Prenat Diagn 35:400-8
Gholipour, Ali; Limperopoulos, Catherine; Clancy, Sean et al. (2014) Construction of a deformable spatiotemporal MRI atlas of the fetal brain: evaluation of similarity metrics and deformation models. Med Image Comput Comput Assist Interv 17:292-9
Gholipour, Ali; Estroff, Judith A; Barnewolt, Carol E et al. (2014) Fetal MRI: A Technical Update with Educational Aspirations. Concepts Magn Reson Part A Bridg Educ Res 43:237-266
Gholipour, Ali; Limperopoulos, Catherine; Clancy, Sean et al. (2014) Construction of a deformable spatiotemporal MRI atlas of the fetal brain: evaluation of similarity metrics and deformation models. Med Image Comput Comput Assist Interv 17:292-9
Gholipour, Ali; Akhondi-Asl, Alireza; Estroff, Judy A et al. (2012) Multi-atlas multi-shape segmentation of fetal brain MRI for volumetric and morphometric analysis of ventriculomegaly. Neuroimage 60:1819-31