Candida albicans is a commensal fungus residing in the oral cavity, the gastrointestinal tract, and the vagina of humans and other warm-blooded animals. It is also an opportunistic pathogen with a disease spectrum ranging from mild superficial infections in overall healthy people to wide-spread, and life-threatening systemic infections in patients with compromised immunity due to underlying disease or immunosuppressive therapy. C. albicans is the 4th most common microorganism causing nosocomial blood stream infections, therefore representing a serious public health challenge of increasing medical and socioeconomic importance. While an impaired host immune function clearly contributes to the severity of Candida infections, the fungus must possess characteristics that facilitate the transition from a harmless commensal to an aggressive pathogen. During the course of infection, C. albicans encounters many different host environments to which it must adapt rapidly to ensure growth and survival. Furthermore, it must be able to cope with alterations in established niches during long-term persistence in the host. Our long-term goal is to determine exactly how the transition from commensal to pathogen takes place and how it can be prevented. Our working hypothesis is that the adaptation of C. albicans through genetic and phenotypic changes during infection plays a much greater role in host-pathogen interactions than is currently appreciated. We are just beginning to understand how C. albicans adapts to varying host environments, whether adaptation is triggered by the host, and how the fungus modulates antigenicity through variations in its surface proteins. One of the major virulence factors in C. albicans is its ability to switch between yeast and hyphal growth morphologies. Yeast and hyphal forms vary in cell wall composition, which leads to differential recognition by the innate immune system and affects the outcome of infection. Here, we will identify the underlying genetic basis for alterations in the morphological program acquired during early stages of infection, and we will determine how specific mutations directly affect host-pathogen interactions, including host recognition, host response, and virulence. We will study strains with abnormal filamentation phenotypes recovered from an oropharyngeal candidiasis and a blood stream infection model and will address the following questions: 1) What are the genomic changes that underlie the morphologically diverse mutants? 2) How fit are these mutants under physiologically relevant growth and stress conditions? 3) Which genetic factors contribute to the unification of cellular morphology, morphology of the multicellular community (colony) and the cell wall? and 4) How does the host recognize and respond to the repertoire of morphologies it encounters? These studies will advance our understanding of host-pathogen interactions from the pathogen perspective that will help reveal how the host and the fungus maintain their balanced relationship in healthy individuals and how disruption of this interaction causes devastating infections in the immunocompromised host.

Public Health Relevance

Fungal infections are a serious health concern for immuno-compromised patients, such as those with HIV/AIDS, cancer patients or patients receiving organ transplants. Fungal infections occur at many body locations and can infect virtually all organs in the human body. The proposed work will address basic questions on host-fungus interactions with the goal of advancing our understanding of how the host and the fungus maintain their balanced relationship in healthy individuals as well as how disruption of this interaction causes devastating infections in the immuno-compromised host.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Academic Research Enhancement Awards (AREA) (R15)
Project #
2R15AI090633-03A1
Application #
9589981
Study Section
Special Emphasis Panel (ZRG1)
Program Officer
Love, Dona
Project Start
2011-02-01
Project End
2021-05-31
Budget Start
2018-06-11
Budget End
2021-05-31
Support Year
3
Fiscal Year
2018
Total Cost
Indirect Cost
Name
Bowdoin College
Department
Biology
Type
Schools of Arts and Sciences
DUNS #
071749923
City
Brunswick
State
ME
Country
United States
Zip Code
Forche, Anja; Cromie, Gareth; Gerstein, Aleeza C et al. (2018) Rapid Phenotypic and Genotypic Diversification After Exposure to the Oral Host Niche in Candida albicans. Genetics 209:725-741
Cuomo, Christina A; Shea, Terrance; Yang, Bo et al. (2017) Whole Genome Sequence of the Heterozygous Clinical Isolate Candida krusei 81-B-5. G3 (Bethesda) 7:2883-2889
Berman, Judith; Forche, Anja (2017) Haplotyping a Non-meiotic Diploid Fungal Pathogen Using Induced Aneuploidies and SNP/CGH Microarray Analysis. Methods Mol Biol 1551:131-146
Todd, Robert T; Forche, Anja; Selmecki, Anna (2017) Ploidy Variation in Fungi: Polyploidy, Aneuploidy, and Genome Evolution. Microbiol Spectr 5:
Forche, Anja (2014) Large-Scale Chromosomal Changes and Associated Fitness Consequences in Pathogenic Fungi. Curr Fungal Infect Rep 8:163-170
Bennett, Richard J; Forche, Anja; Berman, Judith (2014) Rapid mechanisms for generating genome diversity: whole ploidy shifts, aneuploidy, and loss of heterozygosity. Cold Spring Harb Perspect Med 4:
Wartenberg, Anja; Linde, Jörg; Martin, Ronny et al. (2014) Microevolution of Candida albicans in macrophages restores filamentation in a nonfilamentous mutant. PLoS Genet 10:e1004824
Hickman, Meleah A; Zeng, Guisheng; Forche, Anja et al. (2013) The 'obligate diploid' Candida albicans forms mating-competent haploids. Nature 494:55-9