Working Title: ANTI-CANCER RNA NANOCONJUGATESInvestigators: Robert K. DeLong, Adam Wanekaya, and Kartik GhoshI. Abstract Nano-delivery of siRNA and RNA-based splice-site switching oligoribonucleotides(SSO) is an important new approach with chemotherapeutic potential against cancer. Here wewill focus on manufacturing RNA-bound nanoparticles (RNPs). For this purpose gold,manganese or zinc-based core nanoparticles (NPs) will be prepared and RNA attached viadelivery-enhancing materials (protamine or PAMAM dendrimer). In addition to a deliveryadvantage, this approach will greatly enhance RNA?s stability against chemical and enzymaticdegradation. Stabilization of the RNA by the RNPs will be confirmed by electrophoretic andliquid chromatography analysis after exposure to accelerated chemical or enzymaticdegradation assays. The RNPs will be further characterized by electron microscopy, UV,fluorescence and dynamic laser light scatter spectroscopy. Functional nuclear delivery of theRNPs will be evaluated in the Hela 705 splice-site switching assay by delivering a bound RNAoligonucleotide which overlaps the aberrant splice site, corrects splicing and switches-onLuciferase. Ultimately, as proof-of-principle to the important anti-cancer potential of thisapproach, biological activity of RNPs containing siRNA or SSO targeted against B-Raf?animportant model cancer target will be investigated.Keywords:SSO=splice-site switching oligonucleotide, RNP=RNA nanoparticle

Public Health Relevance

This project focuses on nano-manufacturing nanoparticles of gold; manganese and zincwith RNA bound to them (RNPs). In preliminary experiments we have formed such RNPsattaching RNA via delivery enhancing materials (protamine or alternatively PAMAMdendrimer). Given these data and our previous experience with these nanomaterials incombination with DNA; here we will show the RNPs will provide the RNA resistance tochemical and enzymatic degradation and substantial delivery advantage. Finally as proof-of-principle for the chemotherapeutic potential of our approach here we will demonstrate thatRNPs can deliver siRNA or splice-site switching oligomers against B-Raf an important modelcancer target. Thus this proposal addresses a very important barrier for the success of RNA-derived chemotherapy; namely how to combine RNA with nanomaterials so as to retainstructure-function.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Academic Research Enhancement Awards (AREA) (R15)
Project #
7R15CA139390-03
Application #
9088000
Study Section
Nanotechnology Study Section (NANO)
Program Officer
Fu, Yali
Project Start
2013-02-01
Project End
2016-01-31
Budget Start
2015-02-01
Budget End
2016-01-31
Support Year
3
Fiscal Year
2013
Total Cost
$141,417
Indirect Cost
$34,378
Name
Kansas State University
Department
Anatomy/Cell Biology
Type
Schools of Veterinary Medicine
DUNS #
929773554
City
Manhattan
State
KS
Country
United States
Zip Code
66506
Thomas, Spencer E; Comer, Jeffrey; Kim, Min Jung et al. (2018) Comparative functional dynamics studies on the enzyme nano-bio interface. Int J Nanomedicine 13:4523-4536
DeLong, Robert K; Curtis, Chandler B (2017) Toward RNA nanoparticle vaccines: synergizing RNA and inorganic nanoparticles to achieve immunopotentiation. Wiley Interdiscip Rev Nanomed Nanobiotechnol 9:
DeLong, Robert K; Mitchell, Jennifer A; Morris, R Tyler et al. (2017) Enzyme and Cancer Cell Selectivity of Nanoparticles: Inhibition of 3D Metastatic Phenotype and Experimental Melanoma by Zinc Oxide. J Biomed Nanotechnol 13:221-31
Ramani, Meghana; Mudge, Miranda C; Morris, R Tyler et al. (2017) Zinc Oxide Nanoparticle-Poly I:C RNA Complexes: Implication as Therapeutics against Experimental Melanoma. Mol Pharm 14:614-625
Hoffman, Amanda; Wu, Xiaotong; Wang, Jianjie et al. (2017) Two-Dimensional Fluorescence Difference Spectroscopy of ZnO and Mg Composites in the Detection of Physiological Protein and RNA Interactions. Materials (Basel) 10:
McCall, Jayden; Smith, Joshua J; Marquardt, Kelsey N et al. (2017) ZnO Nanoparticles Protect RNA from Degradation Better than DNA. Nanomaterials (Basel) 7:
Hurst, Miranda N; DeLong, Robert K (2016) Two-Dimensional Fluorescence Difference Spectroscopy to Characterize Nanoparticles and their Interactions. Sci Rep 6:33287
Dean, John M; DeLong, Robert K (2015) A high-throughput screening assay for the functional delivery of splice-switching oligonucleotides in human melanoma cells. Methods Mol Biol 1297:187-96
Bhaumik, A; Shearin, A M; Delong, R et al. (2014) Probing the Interaction at the Nano-Bio Interface Using Raman Spectroscopy: ZnO Nanoparticles and Adenosine Triphosphate Biomolecules. J Phys Chem C Nanomater Interfaces 118:18631-18639
Reyes-Reveles, Juan; Sedaghat-Herati, Reza; Gilley, David R et al. (2013) mPEG-PAMAM-G4 nucleic acid nanocomplexes: enhanced stability, RNase protection, and activity of splice switching oligomer and poly I:C RNA. Biomacromolecules 14:4108-15

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