The protein tyrosine phosphatases (PTPs), which dephosphorylate specific phosphotyrosine residues in protein substrates, constitute a large family of signaling enzymes, whose activity is ubiquitously misregulated in human diseases such as leukemias, solid-tumor cancers, type I and type II diabetes, and autoimmune disorders. Tools that are capable of inducing target-specific PTP inhibition or activation would be invaluable for delineation of the precise functions of PTPs in cell signaling and for the validation of PTPs as therapeutic targets. However, the common architecture of the conserved PTP-domain fold impedes the discovery of selective PTP inhibitors, and cell-permeable PTP activators have not been identified to date. The broad objective of the proposed research is to develop tools to specifically inhibit or activate PTP enzymes by targeting either engineered cysteine residues (Specific Aim 1) or naturally occurring cysteine residues (Specific Aim 2).
Specific Aim 1 (Target-specific inhibition and activation of engineered PTPs with biarsenical small molecules) proposes several complementary means for engineering inhibitor- sensitive and activator-sensitive (collectively, ligand-sensitive) PTPs: engineered phosphatases whose activities are uniquely responsive to small molecules. The proposed inhibitor- and activator-sensitization strategies, which can potentially be applied widely across the PTP superfamily, will afford PTP-signaling researchers an unprecedented level of chemical control with which to study a key family of signaling enzymes.
Specific Aim 2 (Targeting naturally occurring cysteine residues for the discovery of Shp2- specific inhibitors and activators) is focused on selectively targeting naturally occurring cysteine residues in a medicinally important PTP, Shp2, with the goal of discovering compounds that have direct implications for drug development. The proposed experiments are aimed at the discovery of drug-like compounds that can target Shp2?s unique allosteric site, potentially providing highly selective Shp2 inhibitors that have not been realized through active-site- directed efforts. Also proposed are small-molecule-discovery efforts targeting two disease- causing Shp2 mutants that contain missense cysteine residues (Y63C and Y279C Shp2, which cause Noonan and LEOPARD syndromes, respectively). Both mutations affect the enzymatic activity of Shp2; efforts to identify compounds that restore wild-type-like Shp2 function by targeting the disease-causing cysteine residues are proposed.

Public Health Relevance

(Relevance to Public Health) Protein tyrosine phosphatases (PTPs) are enzymes that help to send cellular messages by enzymatically removing phosphate groups from other proteins. When cellular phosphate removal goes awry, so do the basic regulatory mechanisms of the cell, and improperly regulated PTP activity has been implicated as a causative agent in a range of human diseases, including cancer, diabetes, and autoimmune disorders. We are designing small-molecule PTP inhibitors and activators that can be used to study the functions of individual PTPs in cellular experiments and to potentially treat PTP-related diseases; this work will thus provide valuable tools for dissecting cellular phosphorylation networks and for validating PTPs as therapeutic targets.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Academic Research Enhancement Awards (AREA) (R15)
Project #
2R15GM071388-04
Application #
9169187
Study Section
Macromolecular Structure and Function A Study Section (MSFA)
Program Officer
Gerratana, Barbara
Project Start
2005-08-15
Project End
2019-07-31
Budget Start
2016-08-01
Budget End
2019-07-31
Support Year
4
Fiscal Year
2016
Total Cost
Indirect Cost
Name
Amherst College
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
066985367
City
Amherst
State
MA
Country
United States
Zip Code
Korntner, Samuel; Pomorski, Adam; Kr??el, Artur et al. (2018) Optimized allosteric inhibition of engineered protein tyrosine phosphatases with an expanded palette of biarsenical small molecules. Bioorg Med Chem 26:2610-2620
Gast, Charles E; Silk, Alain D; Zarour, Luai et al. (2018) Cell fusion potentiates tumor heterogeneity and reveals circulating hybrid cells that correlate with stage and survival. Sci Adv 4:eaat7828
Chan, Wai Cheung; Knowlton, Gregory S; Bishop, Anthony C (2017) Activation of Engineered Protein Tyrosine Phosphatases with the Biarsenical Compound AsCy3-EDT2. Chembiochem 18:1950-1958
Gast, Charles E; Shaw, Aubie K; Wong, Melissa H et al. (2017) Surgical Procedures and Methodology for a Preclinical Murine Model of De Novo Mammary Cancer Metastasis. J Vis Exp :
Bishop, Anthony C (2016) A missense methionine mutation augments catalytic activity but reduces thermal stability in two protein tyrosine phosphatases. Biochem Biophys Res Commun 481:153-158
Pomorski, Adam; Adamczyk, Justyna; Bishop, Anthony C et al. (2015) Probing the target-specific inhibition of sensitized protein tyrosine phosphatases with biarsenical probes. Org Biomol Chem 13:1395-403
Chio, Cynthia M; Lim, Christopher S; Bishop, Anthony C (2015) Targeting a cryptic allosteric site for selective inhibition of the oncogenic protein tyrosine phosphatase Shp2. Biochemistry 54:497-504
Chio, Cynthia M; Cheng, Karen W; Bishop, Anthony C (2015) Direct Chemical Activation of a Rationally Engineered Signaling Enzyme. Chembiochem 16:1735-9
Chio, Cynthia M; Yu, Xiaoling; Bishop, Anthony C (2015) Rational design of allosteric-inhibition sites in classical protein tyrosine phosphatases. Bioorg Med Chem 23:2828-38
Harris, Leigh K; Frumm, Stacey M; Bishop, Anthony C (2013) A general assay for monitoring the activities of protein tyrosine phosphatases in living eukaryotic cells. Anal Biochem 435:99-105

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