This Principal Investigator proposes to study the third variable (V3) region of gp120 to identify determinants which may influence vertical transmission of HIV-1 from a mother to her infant. The pattern of glycosylation of the V3 region of HIV-1 variants may be particularly important in this setting and special attention will be directed to this. The proposed studies will test the hypothesis that the genotype and glycosylation pattern in the V3 region of gp120 are important determinants of HIV-1 vertical transmission.
The specific aims are to: (1) Clone and sequence V3 region cDNAs from RNA of HIV-1 variants in Ugandan mother-infant pairs that were participants in NIH/WHO studies of pediatric HIV-1 vertical transmission. By these assays the Investigator will characterize the extent of genetic diversity among HIV-1 variants in pregnant Ugandan women and children, and will determine the genotypic relatedness between the viral populations in these persons. Statistical methods will be used to increase the probability that the viral profiles obtained from DNA sequence analysis accurately reflect the profiles of HIV-1 variants in each mother and infant studied. The PCR amplification will be subdivided into 10 aliquots for each sample and 100 clones will be sequences. (2) Determine the pattern of N-linked glycosylation in the V3 region of the variants in each subject using a novel glycosylation assay. (3) analyze data generated in Specific Aims #1 and #2 to identify genotypic features important in HIV-1 vertical transmission. (4) Use heteroduplex assays to define further the role of V3 region genotype in HIV-1 vertical transmission.

Agency
National Institute of Health (NIH)
Institute
Eunice Kennedy Shriver National Institute of Child Health & Human Development (NICHD)
Type
First Independent Research Support & Transition (FIRST) Awards (R29)
Project #
5R29HD034348-05
Application #
2889281
Study Section
AIDS and Related Research Study Section 2 (ARRB)
Program Officer
Nugent, Robert
Project Start
1996-08-01
Project End
2001-07-31
Budget Start
1999-08-01
Budget End
2000-07-31
Support Year
5
Fiscal Year
1999
Total Cost
Indirect Cost
Name
Johns Hopkins University
Department
Pathology
Type
Schools of Medicine
DUNS #
045911138
City
Baltimore
State
MD
Country
United States
Zip Code
21218
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