Mutations in germ cells are critical components of all hereditary diseases in humans. When present in somatic cells, mutations can constitute the essential pathogenetic basis of cancer, and of phenomena such as ageing. The potential for DNA damage to be translated into permanent mutations is mitigated by a complex repertoirs of cellular responses, including the process of nucleotide excision repair, where by damaged nucleotides are enzymatically excised from the genome of living cells. The long-term goals of this proposal are to understand the molecular mechanism of nucleotide excision repair of DNA in eukaryotic cells, using the yeast Saccharomyces cerevisiae as a model system. The proposed studies include the isolation of genes known from genetic studies to be required for nucleotide excision repair, by molecular cloning. The genes will be characterized in detail and tailored into suitable expression vectors for overexpression of proteins. These proteins will be purified from yeast cells with a view to reconstituting a damage-specific DNA incising activity in vitro and to characterizing the biochemistry of excision repair in yeast. The cloned yeast genes will also be expressed in mammalian cells known to be defective in nucleotide excision repair, with a view to demonstrating functional homology between DNA repair genes from lower and higher eukaryotes.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Method to Extend Research in Time (MERIT) Award (R37)
Project #
5R37CA012428-22
Application #
3481650
Study Section
Physiological Chemistry Study Section (PC)
Project Start
1979-08-01
Project End
1994-04-30
Budget Start
1991-05-01
Budget End
1992-04-30
Support Year
22
Fiscal Year
1991
Total Cost
Indirect Cost
Name
University of Texas Sw Medical Center Dallas
Department
Type
Schools of Medicine
DUNS #
City
Dallas
State
TX
Country
United States
Zip Code
75390
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You, Z; Feaver, W J; Friedberg, E C (1998) Yeast RNA polymerase II transcription in vitro is inhibited in the presence of nucleotide excision repair: complementation of inhibition by Holo-TFIIH and requirement for RAD26. Mol Cell Biol 18:2668-76
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Reed, S H; You, Z; Friedberg, E C (1998) The yeast RAD7 and RAD16 genes are required for postincision events during nucleotide excision repair. In vitro and in vivo studies with rad7 and rad16 mutants and purification of a Rad7/Rad16-containing protein complex. J Biol Chem 273:29481-8
Rodriguez, K; Talamantez, J; Huang, W et al. (1998) Affinity purification and partial characterization of a yeast multiprotein complex for nucleotide excision repair using histidine-tagged Rad14 protein. J Biol Chem 273:34180-9
Ramos, W; Tappe, N; Talamantez, J et al. (1997) Two distinct DNA ligase activities in mitotic extracts of the yeast Saccharomyces cerevisiae. Nucleic Acids Res 25:1485-92
Wang, Z; Wu, X; Friedberg, E C (1997) Molecular mechanism of base excision repair of uracil-containing DNA in yeast cell-free extracts. J Biol Chem 272:24064-71
Feaver, W J; Henry, N L; Wang, Z et al. (1997) Genes for Tfb2, Tfb3, and Tfb4 subunits of yeast transcription/repair factor IIH. Homology to human cyclin-dependent kinase activating kinase and IIH subunits. J Biol Chem 272:19319-27
Wang, Z; Wei, S; Reed, S H et al. (1997) The RAD7, RAD16, and RAD23 genes of Saccharomyces cerevisiae: requirement for transcription-independent nucleotide excision repair in vitro and interactions between the gene products. Mol Cell Biol 17:635-43

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