High-throughput screening approaches are ubiquitious in the pharmaceutical industry as part of the drug discovery process. A variety of sensors are used in these screens, the most common of which are spectroscopic. Such absorbance or fluorescence based high-throughput screens inevitably require the use of extrinsic probes to provide a signal, and often require labeling of the target receptor or the test ligand. Binding reactions are then monitored indirectly, grom changes in the optical properties of the extrinsic label. We propose the design and production of a high-throughput differential scanning calorimeter (HT-DSC) for use in drug discovery. Calorimetry offers a significant advantage over spectroscopic approaches in that it directly monitors heat changes for binding reactions without the need for receptor modification or labeling. Heat is a """"""""universal signal"""""""" that can not only detect binding reactions qualitatively but can also be used to dgorously quantify binding reactions by providing detailed thermodynamic information. In this Phase I project period, we will complete the detailed design plans for a 100 cell array differential scanning calorimeter with sensitivity and sample sizes comparable to existing single-cell biocalorimeters that are commercially available. We will complete demonstration experiments using DNA and protein binding reactions to illustrate the advantages of array calorimetry, using existing prototype 16-cell and 100-cell HTDSC instruments. Finally we will begin development of assay protocols for specific DNA and protein reactions for use in Phase II of this project when production prototype HT-DSC instruments will be produced and tested.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Small Business Innovation Research Grants (SBIR) - Phase II (R44)
Project #
1R44CA103437-01A1
Application #
6784329
Study Section
Special Emphasis Panel (ZRG1-SSS-Y (10))
Program Officer
Lees, Robert G
Project Start
2004-07-01
Project End
2004-11-30
Budget Start
2004-07-01
Budget End
2004-11-30
Support Year
1
Fiscal Year
2004
Total Cost
$139,910
Indirect Cost
Name
Energetic Genomics Corporation
Department
Type
DUNS #
095451006
City
Lindon
State
UT
Country
United States
Zip Code
84062
Garbett, Nichola C; Merchant, Michael L; Helm, C William et al. (2014) Detection of cervical cancer biomarker patterns in blood plasma and urine by differential scanning calorimetry and mass spectrometry. PLoS One 9:e84710
Garbett, Nichola C; Merchant, Michael L; Chaires, Jonathan B et al. (2013) Calorimetric analysis of the plasma proteome: identification of type 1 diabetes patients with early renal function decline. Biochim Biophys Acta 1830:4675-80
Garbett, Nichola C; Mekmaysy, Chongkham S; Helm, C William et al. (2009) Differential scanning calorimetry of blood plasma for clinical diagnosis and monitoring. Exp Mol Pathol 86:186-91
Garbett, Nichola C; Miller, James J; Jenson, Alfred B et al. (2008) Calorimetry outside the box: a new window into the plasma proteome. Biophys J 94:1377-83
Garbett, Nichola C; Miller, James J; Jenson, A Bennett et al. (2007) Calorimetric analysis of the plasma proteome. Semin Nephrol 27:621-6
Garbett, Nichola C; Miller, James J; Jenson, A Bennett et al. (2007) Interrogation of the plasma proteome with differential scanning calorimetry. Clin Chem 53:2012-4