Cystic fibrosis is the most common autosomal recessive genetic disease in the United States. With the recent recommendation for multi-mutation CF screening by the ACMG/ACOG, more labs will be implementing multiplexed genotyping assays. Presently, DNA diagnostic tests for CF are expensive, complicated to run and limited to certain ethnic backgrounds. Using a powerful new technology called AEGIS we propose developing a fast, inexpensive, reliable and easy to run a multiplexed mutation detection system for clinical screening of mutations in the CFTR gene that cause CF in the majority of Americans. In Phase I, proof of concept studies will take place to show that the system is feasible for testing CF mutations on human genomic samples. In Phase Il, we intend to develop a clinical diagnostic assay multi-mutation carrier and newborn CF screening.

Proposed Commercial Applications

This project could result in an easy to run, low-cost, high-throughput, and ultrasensitive method for Cystic Fibrosis DNA mutation screening that minimizes PCR amplicon handling and is run on an inexpensive validated instrument platform. In addition, validation from this project will open the doors to other test kit development such as population carrier screening for other genetic diseases and research based chromosome mapping studies.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Small Business Innovation Research Grants (SBIR) - Phase II (R44)
Project #
1R44DK062743-01
Application #
6551315
Study Section
Special Emphasis Panel (ZRG1-SSS-Y (10))
Program Officer
Mckeon, Catherine T
Project Start
2002-09-06
Project End
2003-02-28
Budget Start
2002-09-06
Budget End
2003-02-28
Support Year
1
Fiscal Year
2002
Total Cost
$99,633
Indirect Cost
Name
Eragen Biosciences, Inc.
Department
Type
DUNS #
City
Madison
State
WI
Country
United States
Zip Code
53717
Johnson, Scott C; Marshall, David J; Harms, Gerda et al. (2004) Multiplexed genetic analysis using an expanded genetic alphabet. Clin Chem 50:2019-27