? The overall objective of this proposal is to develop methods for the cost-effective, large-scale synthesis (up to kilograms amounts) of capped, polyadenylated RNA. Several companies are using capped RNA to produce human vaccines against cancers and infectious diseases such as HIV and biowarfare agents. Ambion's patented mMESSAGEmMACHINE(r) kit provides high-yielding transcription reactions for the synthesis of capped RNA. Although this is the best available technology, the costs of producing capped RNA for therapeutic purposes in accordance to the FDA Quality System Requirement (21 CFR, Part 820) are too high for commercial viability. Our objective is to reduce the manufacturing costs such that the use of capped RNA for vaccine development and other therapeutic applications is economically feasible.
Our specific aims are: 1. Increase the functional unit activity (purity, homogeneity, orientation) of capped RNA. 2. Decrease the overall cost of capped RNA manufacturing. In Phase I, we 1) developed a batch-fed transcription system that increased the RNA yield by 5-fold, 2) enhanced capped RNA unit activity by producing greater than 80% properly oriented caps, 3) improved the template DNA removal step, 4) produced two key reaction components in animal-free systems, and 5) reduced the cost per dose by -10-fold. For Phase II, we will build on this success by further optimizing the reaction and reducing production costs. We will design and test a reactor for large-scale reactions that allows continuous monitoring and adjusting of the relevant components of the reaction. We will also investigate new cap analogs and optimize RNA polyadenylation and purification to both reduce costs and improve unit activity. Finally, we will manufacture FDA-compliant enzymes and reagents to synthesize capped RNA at a lower cost. Based on our prior success, we believe we can further decrease the costs to approximately $10/dose for human use, and thereby enable the development of RNA-based vaccines for existing and emerging pathogens. ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Small Business Innovation Research Grants (SBIR) - Phase II (R44)
Project #
5R44GM070156-04
Application #
7114268
Study Section
Special Emphasis Panel (ZRG1-GGG-J (10))
Program Officer
Portnoy, Matthew
Project Start
2004-01-01
Project End
2010-08-31
Budget Start
2006-09-01
Budget End
2010-08-31
Support Year
4
Fiscal Year
2006
Total Cost
$489,822
Indirect Cost
Name
Ambion Diagnostics, Inc.
Department
Type
DUNS #
611733069
City
Austin
State
TX
Country
United States
Zip Code
78744
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Kore, Anilkumar R; Shanmugasundaram, Muthian; Charles, Irudaya et al. (2007) Synthesis and application of 2'-fluoro-substituted cap analogs. Bioorg Med Chem Lett 17:5295-9
Kore, Anilkumar R; Parmar, Gaurang; Reddy, Srinu (2006) An efficient process for synthesis of 2'-O-methyl and 3'-O-methyl guanosine from 2-aminoadenosine using diazomethane and the catalyst stannous chloride. Nucleosides Nucleotides Nucleic Acids 25:307-14
Kore, Anilkumar R; Parmar, Gaurang (2006) An industrial process for selective synthesis of 7-methyl guanosine 5'-diphosphate: versatile synthon for synthesis of mRNA cap analogues. Nucleosides Nucleotides Nucleic Acids 25:337-40